ENSMUSG00000103897


Mus musculus

Features
Gene ID: ENSMUSG00000103897
  
Biological name :Pcdhga8
  
Synonyms : Pcdhga8 / protocadherin gamma subfamily A, 8
  
Possible biological names infered from orthology : Q9Y5G5
  
Species: Mus musculus
  
Chr. number: 18
Strand: 1
Band: B3
Gene start: 37725706
Gene end: 37841873
  
Corresponding Affymetrix probe sets: 1423628_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000067728
NCBI entrez gene - 93716     See in Manteia.
MGI - MGI:1935221
RefSeq - NM_033591
RefSeq Peptide - NP_291069
swissprot - Q91XY0
Ensembl - ENSMUSG00000103897
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pcdh1g2ENSDARG00000101232Danio rerio
 pcdh1gb2ENSDARG00000101307Danio rerio
 pcdh1gb9ENSDARG00000088475Danio rerio
 pcdh2g5ENSDARG00000098788Danio rerio
 PCDHB15ENSDARG00000101338Danio rerio
 ENSGALG00000041306Gallus gallus
 ENSGALG00000042230Gallus gallus
 ENSGALG00000041692Gallus gallus
 ENSGALG00000036159Gallus gallus
 ENSGALG00000041947Gallus gallus
 ENSGALG00000041601Gallus gallus
 ENSGALG00000029700Gallus gallus
 Q9Y5G5ENSG00000253767Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Pcdhga10 / protocadherin gamma subfamily A, 10 / Q9Y5H3*ENSMUSG0000010222273
Pcdhga7 / protocadherin gamma subfamily A, 7 / Q9Y5G6*ENSMUSG0000010347273
Pcdhga5 / protocadherin gamma subfamily A, 5 / Q9Y5G8*ENSMUSG0000010356771
Q91XY4 / Pcdhga4 / Protocadherin gamma-A4 / Q9Y5G9* / protocadherin gamma subfamily A, 4*ENSMUSG0000010367770
Pcdhga3 / protocadherin gamma subfamily A, 3 / Q9Y5H0*ENSMUSG0000010434670
Pcdhga11 / protocadherin gamma subfamily A, 11 / Q9Y5H2*ENSMUSG0000010274269
Pcdhga6 / protocadherin gamma subfamily A, 6 / Q9Y5G7*ENSMUSG0000010379367
Pcdhac2ENSMUSG0000010269740
Pcdh10 / protocadherin 10 / Q9P2E7*ENSMUSG0000004910039
Pcdha3 / protocadherin alpha 3ENSMUSG0000010231238
Pcdha2 / protocadherin alpha 2ENSMUSG0000010414837
Pcdh17 / protocadherin 17 / O14917*ENSMUSG0000003556633
Pcdh18 / Q8VHR0 / Protocadherin 18 / Q9HCL0*ENSMUSG0000003789231
Pcdh19 / Q80TF3 / Protocadherin-19 / Q8TAB3*ENSMUSG0000005132330
Pcdh8 / Q7TSK3 / Protocadherin-8 / O95206*ENSMUSG0000003642228
O55134 / Pcdh12 / Protocadherin-12 / Q9NPG4*ENSMUSG0000002444028


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR031904  Cadherin, C-terminal catenin-binding domain
 IPR032455  Cadherin, cytoplasmic C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IDA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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