ENSMUSG00000103793


Mus musculus

Features
Gene ID: ENSMUSG00000103793
  
Biological name :Pcdhga6
  
Synonyms : Pcdhga6 / protocadherin gamma subfamily A, 6
  
Possible biological names infered from orthology : Q9Y5G7
  
Species: Mus musculus
  
Chr. number: 18
Strand: 1
Band: B3
Gene start: 37707039
Gene end: 37841873
  
Corresponding Affymetrix probe sets: 1423628_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000141803
NCBI entrez gene - 93714     See in Manteia.
MGI - MGI:1935218
RefSeq - NM_033589
RefSeq Peptide - NP_291067
swissprot - Q91XY2
Ensembl - ENSMUSG00000103793
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pcdh1g2ENSDARG00000101232Danio rerio
 pcdh1gb2ENSDARG00000101307Danio rerio
 pcdh1gb9ENSDARG00000088475Danio rerio
 pcdh2g5ENSDARG00000098788Danio rerio
 PCDHB15ENSDARG00000101338Danio rerio
 ENSGALG00000041306Gallus gallus
 ENSGALG00000042230Gallus gallus
 ENSGALG00000041692Gallus gallus
 ENSGALG00000036159Gallus gallus
 ENSGALG00000041947Gallus gallus
 ENSGALG00000041601Gallus gallus
 ENSGALG00000029700Gallus gallus
 Q9Y5G7ENSG00000253731Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Pcdhga7 / protocadherin gamma subfamily A, 7 / Q9Y5G6*ENSMUSG0000010347273
Pcdhga10 / protocadherin gamma subfamily A, 10 / Q9Y5H3*ENSMUSG0000010222272
Pcdhga5 / protocadherin gamma subfamily A, 5 / Q9Y5G8*ENSMUSG0000010356770
Q91XY4 / Pcdhga4 / Protocadherin gamma-A4 / Q9Y5G9* / protocadherin gamma subfamily A, 4*ENSMUSG0000010367769
Pcdhga3 / protocadherin gamma subfamily A, 3 / Q9Y5H0*ENSMUSG0000010434669
Pcdhga8 / protocadherin gamma subfamily A, 8 / Q9Y5G5*ENSMUSG0000010389767
Pcdhga11 / protocadherin gamma subfamily A, 11 / Q9Y5H2*ENSMUSG0000010274267
Pcdhac2ENSMUSG0000010269740
Pcdha2 / protocadherin alpha 2ENSMUSG0000010414838
Pcdha3 / protocadherin alpha 3ENSMUSG0000010231238
Pcdh10 / protocadherin 10 / Q9P2E7*ENSMUSG0000004910037
Pcdh17 / protocadherin 17 / O14917*ENSMUSG0000003556632
Pcdh19 / Q80TF3 / Protocadherin-19 / Q8TAB3*ENSMUSG0000005132329
Pcdh18 / Q8VHR0 / Protocadherin 18 / Q9HCL0*ENSMUSG0000003789229
O55134 / Pcdh12 / Protocadherin-12 / Q9NPG4*ENSMUSG0000002444028
Pcdh8 / Q7TSK3 / Protocadherin-8 / O95206*ENSMUSG0000003642227


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR031904  Cadherin, C-terminal catenin-binding domain
 IPR032455  Cadherin, cytoplasmic C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IBA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007267 cell-cell signaling IBA
 biological_processGO:0007399 nervous system development IBA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IDA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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