ENSGALG00000041601


Gallus gallus

Features
Gene ID: ENSGALG00000041601
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : O60330 / PCDHGA10 / PCDHGA11 / PCDHGA12 / PCDHGA2 / PCDHGA3 / PCDHGA4 / PCDHGA5 / PCDHGA6 / PCDHGA7 / PCDHGA8 / Protocadherin gamma-A4 / protocadherin gamma subfamily A, 10 / protocadherin gamma subfamily A, 11 / protocadherin gamma subfamily A, 12 / protocadherin gamma subfamily A, 2 / protocadherin gamma subfamily A, 3 / protocadherin gamma subfamily A, 4 / protocadherin gamma subfamily A, 5 / protocadherin gamma subfamily A, 6 / protocadherin gamma subfamily A, 7 / protocadherin gamma subfamily A, 8 / Q91XY4 / Q9Y5G5 / Q9Y5G6 / Q9Y5G7 / Q9Y5G8 / Q9Y5G9 / Q9Y5H0 / Q9Y5H1 / Q9Y5H2 / Q9Y5H3
  
Species: Gallus gallus
  
Chr. number: 13
Strand: 1
Band:
Gene start: 1783523
Gene end: 1786817
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000047699
Ensembl peptide - ENSGALP00000055509
Ensembl peptide - ENSGALP00000047803
NCBI entrez gene - 107054488     See in Manteia.
RefSeq - XM_015293566
swissprot - A0A1D5PRI2
swissprot - A0A1D5P538
swissprot - A0A1D5P4T7
Ensembl - ENSGALG00000041601
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 O60330ENSG00000253159Homo sapiens
 Q9Y5G5ENSG00000253767Homo sapiens
 Q9Y5G6ENSG00000253537Homo sapiens
 Q9Y5G7ENSG00000253731Homo sapiens
 Q9Y5G8ENSG00000253485Homo sapiens
 Q9Y5G9ENSG00000262576Homo sapiens
 Q9Y5H0ENSG00000254245Homo sapiens
 Q9Y5H1ENSG00000081853Homo sapiens
 Q9Y5H2ENSG00000253873Homo sapiens
 Q9Y5H3ENSG00000253846Homo sapiens
 Pcdhga10ENSMUSG00000102222Mus musculus
 Pcdhga11ENSMUSG00000102742Mus musculus
 Pcdhga3ENSMUSG00000104346Mus musculus
 Pcdhga5ENSMUSG00000103567Mus musculus
 Pcdhga6ENSMUSG00000103793Mus musculus
 Pcdhga7ENSMUSG00000103472Mus musculus
 Pcdhga8ENSMUSG00000103897Mus musculus
 Q91XY4ENSMUSG00000103677Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
O60330* / Q9Y5H3* / Q91XY4* / Q9Y5G5* / Q9Y5G6* / Q9Y5G7* / Q9Y5G8* / Q9Y5G9* / Q9Y5H0* / Q9Y5H1* / Q9Y5H2* / PCDHGA2* / PCDHGA8* / PCDHGA7* / PCDHGA6* / PCDHGA5* / PCDHGA4* / PCDHGA3* / PC...ENSGALG0000002970092
O60330* / Q9Y5H3* / Q91XY4* / Q9Y5G5* / Q9Y5G6* / Q9Y5G7* / Q9Y5G8* / Q9Y5G9* / Q9Y5H0* / Q9Y5H1* / Q9Y5H2* / PCDHGA2* / PCDHGA8* / PCDHGA7* / PCDHGA6* / PCDHGA5* / PCDHGA4* / PCDHGA3* / PC...ENSGALG0000003615989
O60330* / Q9Y5H3* / Q91XY4* / Q9Y5G5* / Q9Y5G6* / Q9Y5G7* / Q9Y5G8* / Q9Y5G9* / Q9Y5H0* / Q9Y5H1* / Q9Y5H2* / PCDHGA2* / PCDHGA8* / PCDHGA7* / PCDHGA6* / PCDHGA5* / PCDHGA4* / PCDHGA3* / PC...ENSGALG0000004169287
O60330* / Q9Y5H3* / Q91XY4* / Q9Y5G5* / Q9Y5G6* / Q9Y5G7* / Q9Y5G8* / Q9Y5G9* / Q9Y5H0* / Q9Y5H1* / Q9Y5H2* / PCDHGA2* / PCDHGA8* / PCDHGA7* / PCDHGA6* / PCDHGA5* / PCDHGA4* / PCDHGA3* / PC...ENSGALG0000004194786
O60330* / Q9Y5H3* / Q91XY4* / Q9Y5G5* / Q9Y5G6* / Q9Y5G7* / Q9Y5G8* / Q9Y5G9* / Q9Y5H0* / Q9Y5H1* / Q9Y5H2* / PCDHGA2* / PCDHGA8* / PCDHGA7* / PCDHGA6* / PCDHGA5* / PCDHGA4* / PCDHGA3* / PC...ENSGALG0000004130686
O60330* / Q9Y5H3* / Q91XY4* / Q9Y5G5* / Q9Y5G6* / Q9Y5G7* / Q9Y5G8* / Q9Y5G9* / Q9Y5H0* / Q9Y5H1* / Q9Y5H2* / PCDHGA2* / PCDHGA8* / PCDHGA7* / PCDHGA6* / PCDHGA5* / PCDHGA4* / PCDHGA3* / PC...ENSGALG0000004223077
Q9Y5E8* / PCDHB15* / protocadherin beta 15*ENSGALG0000004446343
PCDHGC3 / Gallus gallus protocadherin gamma subfamily A, 2 (PCDHGA2), mRNA.ENSGALG0000002856541
PCDH17 / protocadherin 17 / O14917*ENSGALG0000001694134
PCDH19 / protocadherin-19 precursor / Q80TF3* / Q8TAB3* / protocadherin 19*ENSGALG0000000682231
PCDH8 / protocadherin-8 precursor / O95206* / Q7TSK3* / protocadherin 8*ENSGALG0000003625831
PCDH12 / protocadherin 12 / O55134* / Q9NPG4*ENSGALG0000000254430
PCDH18 / protocadherin 18 / Q8VHR0* / Q9HCL0*ENSGALG0000000973230


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR032455  Cadherin, cytoplasmic C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr