ENSG00000143970


Homo sapiens

Features
Gene ID: ENSG00000143970
  
Biological name :ASXL2
  
Synonyms : additional sex combs like 2, transcriptional regulator / ASXL2 / Q76L83
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: -1
Band: p23.3
Gene start: 25733753
Gene end: 25878516
  
Corresponding Affymetrix probe sets: 1555266_a_at (Human Genome U133 Plus 2.0 Array)   218659_at (Human Genome U133 Plus 2.0 Array)   226251_at (Human Genome U133 Plus 2.0 Array)   229359_at (Human Genome U133 Plus 2.0 Array)   237095_at (Human Genome U133 Plus 2.0 Array)   240072_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000391447
Ensembl peptide - ENSP00000337250
Ensembl peptide - ENSP00000383920
NCBI entrez gene - 55252     See in Manteia.
OMIM - 612991
RefSeq - XM_017004430
RefSeq - NM_018263
RefSeq - XM_011532950
RefSeq - XM_011532951
RefSeq - XM_017004429
RefSeq - XM_006712039
RefSeq - XM_006712040
RefSeq Peptide - NP_060733
swissprot - Q76L83
swissprot - E7EWD6
Ensembl - ENSG00000143970
  
Related genetic diseases (OMIM): 617190 - Shashi-Pena syndrome, 617190
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 asxl2ENSDARG00000076501Danio rerio
 ASXL2ENSGALG00000016531Gallus gallus
 Asxl2ENSMUSG00000037486Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ASXL3 / Q9C0F0 / additional sex combs like 3, transcriptional regulatorENSG0000014143132
ASXL1 / Q8IXJ9 / additional sex combs like 1, transcriptional regulatorENSG0000017145630


Protein motifs (from Interpro)
Interpro ID Name
 IPR007759  HB1/Asxl, restriction endonuclease HTH domain
 IPR024811  Polycomb protein ASX/ASX-like
 IPR024817  ASX-like protein 2
 IPR026905  Protein ASX-like, PHD domain
 IPR028020  ASX homology domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0016579 protein deubiquitination TAS
 biological_processGO:0035360 positive regulation of peroxisome proliferator activated receptor signaling pathway IDA
 biological_processGO:0045600 positive regulation of fat cell differentiation IDA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0042975 peroxisome proliferator activated receptor binding IDA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
UCH proteinases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000256 Macrocephaly "The presence of an abnormally large `skull` (FMA:46565)." [HPO:probinson]
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 HP:0000276 Long face 
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 HP:0000278 Retrognathia 
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 HP:0000316 Hypertelorism 
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 HP:0000358 Posteriorly rotated ears "A type of `abnormal location of the ears` (HP:0000357) in which the position of the ears is characterized by posterior rotation (the superior part of the ears is rotated towards the back of the head, and the inferior part of the ears towards the front)." [HPO:probinson]
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000455 Broad nasal tip 
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 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
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 HP:0000520 Proptosis 
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 HP:0000750 Impaired language development 
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 HP:0000939 Osteoporosis "Osteoporosis is a systemic skeletal disease characterized by low bone density and microarchitectural deterioration of bone tissue with a consequent increase in bone fragility. According to the WHO, osteoporosis is characterized by a value of BMD 2.5 standard deviations or more below the young adult mean." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001631 Atrial septal defect "Atrial septal defect (ASD) is a congenital heart defect that enables blood flow between the left and right atria via the interatrial septum. The three common types of ASD are sinus venosus defects, ostium secundum defects, and ostium primum defects." [HPO:curators]
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 HP:0001943 Hypoglycemia "A lower than normal level of blood glucose." [HPO:curators]
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 HP:0002119 Ventriculomegaly 
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 HP:0002553 Arched eyebrows 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002808 Kyphosis 
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 HP:0003593 Early onset 
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 HP:0003812 Phenotypic variability 
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 HP:0005616 Accelerated skeletal maturation "An abnormally increased rate of skeletal maturation. Accelerated skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
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 HP:0006191 Deep palmar creases "An increased depth of the palmar creases." [HPO:curators]
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 HP:0008872 Feeding problems in infancy 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000100811 YY1 / P25490 / YY1 transcription factor  / complex
 ENSG00000164916 FOXK1 / P85037 / forkhead box K1  / complex
 ENSG00000172534 HCFC1 / P51610 / host cell factor C1  / complex
 ENSG00000141568 FOXK2 / Q01167 / forkhead box K2  / complex
 ENSG00000163930 BAP1 / Q92560 / BRCA1 associated protein 1  / complex / reaction
 ENSG00000147162 OGT / O15294 / O-linked N-acetylglucosamine (GlcNAc) transferase  / complex






 

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