ENSG00000155974


Homo sapiens

Features
Gene ID: ENSG00000155974
  
Biological name :GRIP1
  
Synonyms : glutamate receptor interacting protein 1 / GRIP1 / Q9Y3R0
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q14.3
Gene start: 66347431
Gene end: 67069162
  
Corresponding Affymetrix probe sets: 214018_at (Human Genome U133 Plus 2.0 Array)   235957_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000495444
Ensembl peptide - ENSP00000446047
Ensembl peptide - ENSP00000446067
Ensembl peptide - ENSP00000352780
Ensembl peptide - ENSP00000381098
Ensembl peptide - ENSP00000438500
Ensembl peptide - ENSP00000438921
Ensembl peptide - ENSP00000439053
Ensembl peptide - ENSP00000439124
Ensembl peptide - ENSP00000440918
Ensembl peptide - ENSP00000443006
Ensembl peptide - ENSP00000443392
Ensembl peptide - ENSP00000443860
Ensembl peptide - ENSP00000446011
Ensembl peptide - ENSP00000446024
NCBI entrez gene - 23426     See in Manteia.
OMIM - 604597
RefSeq - XM_017019102
RefSeq - NM_001178074
RefSeq - NM_021150
RefSeq - XM_005268754
RefSeq - XM_005268757
RefSeq - XM_011538093
RefSeq - XM_017019098
RefSeq - XM_017019099
RefSeq - XM_017019100
RefSeq - XM_017019101
RefSeq Peptide - NP_066973
RefSeq Peptide - NP_001171545
swissprot - Q9Y3R0
swissprot - F5H3F9
swissprot - F5H3G9
swissprot - F5H424
swissprot - F5H4M4
swissprot - F5H4N6
swissprot - F5H4P8
swissprot - F5H4Q7
swissprot - F5H5I0
swissprot - H0YFK8
swissprot - H0YGF1
swissprot - H0YFY3
swissprot - H0YGM4
Ensembl - ENSG00000155974
  
Related genetic diseases (OMIM): 617667 - Fraser syndrome 3, 617667
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 grip1ENSDARG00000015053Danio rerio
 GRIP1ENSGALG00000009895Gallus gallus
 Grip1ENSMUSG00000034813Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GRIP2 / glutamate receptor interacting protein 2ENSG0000014459657


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR030026  Glutamate receptor-interacting protein 1
 IPR036034  PDZ superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008104 protein localization IEA
 biological_processGO:0016358 dendrite development IEA
 biological_processGO:0030521 androgen receptor signaling pathway NAS
 biological_processGO:0035556 intracellular signal transduction NAS
 biological_processGO:0045893 positive regulation of transcription, DNA-templated NAS
 biological_processGO:0150012 positive regulation of neuron projection arborization ISS
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005886 plasma membrane ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0043005 neuron projection ISS
 cellular_componentGO:0045121 membrane raft IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0045211 postsynaptic membrane IEA
 cellular_componentGO:0055037 recycling endosome IEA
 molecular_functionGO:0003713 transcription coactivator activity NAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008013 beta-catenin binding TAS
 molecular_functionGO:0008022 protein C-terminus binding IPI
 molecular_functionGO:0030159 receptor signaling complex scaffold activity NAS
 molecular_functionGO:0035259 glucocorticoid receptor binding IPI
 molecular_functionGO:0050681 androgen receptor binding NAS


Pathways (from Reactome)
Pathway description
Trafficking of GluR2-containing AMPA receptors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000003 Multicystic kidney "Multicystic dysplasia of the kidney is characterized by multiple cysts of varying size in the kidney and the absence of a normal pelvocaliceal system. The condition is associated with ureteral or ureteropelvic atresia, and the affected kidney is nonfunctional." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
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 HP:0000046 Scrotal hypoplasia 
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 HP:0000047 Hypospadias "Displacement of the urethral opening on the ventral (inferior) surface of the penis." [HPO:curators]
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 HP:0000054 Micropenis 
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 HP:0000062 Ambiguous genitalia 
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 HP:0000068 Urethral atresia 
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 HP:0000089 Renal hypoplasia 
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 HP:0000148 Vaginal atresia 
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 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
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 HP:0000183 Difficulty in tongue movements 
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 HP:0000204 Cleft lip "A gap in the `upper lip` (FMA:59817). This is a congenital defect resulting from nonfusion of tissues of the lip during embryonal development." [HPO:probinson]
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000238 Hydrocephalus 
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000316 Hypertelorism 
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 HP:0000368 Low-set, posteriorly rotated ears 
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000377 Abnormal form of ears "Abnormal form of the out part of the ear (also referred to as the auricle or pinna)." [HPO:curators]
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 HP:0000378 Cup-shaped ears "Small auricles that grow forward over the meatus (ear canal)." [HPO:curators]
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 HP:0000405 Hearing loss, conductive 
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 HP:0000413 External auditory canal atresia "Absence or failure to form of the external auditory canal." [HPO:curators]
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 HP:0000430 Hypoplastic nasal alae "Thinned, deficient, or excessively arched `ala nasi` (FMA:59519)." [pmid:19152422]
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 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
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 HP:0000445 Broad nose 
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 HP:0000452 Choanal stenosis "Abnormal narrowing of the choana (the posterior nasal aperture)." [HPO:curators]
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 HP:0000528 Anophthalmia "Absence of a true eyeball." [HPO:curators]
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 HP:0000561 Absent eyelashes "Lack of eyelashes." [HPO:curators]
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 HP:0000568 Microphthalmos "A developmental anomaly characterized by abnormal smallness of one or both eyes." [HPO:curators]
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 HP:0000618 Blindness 
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 HP:0000636 Upper eyelid coloboma "A `coloboma` (HP:0000589) of the `upper eyelid` (FMA:54439)." [HPO:probinson]
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 HP:0000678 Dental overcrowding 
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 HP:0000689 Dental malocclusion "Dental malocclusion refers to an abnormality of the occlusion, or alignment, of the teeth and the way the upper and lower teeth fit together, resulting in overcrowding of teeth or in abnormal bite patterns." [HPO:curators]
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 HP:0000777 Abnormality of the thymus "Abnormality of the thymus, an organ located in the upper anterior portion of the chest cavity just behind the sternum and whose main function is to provide an environment for T lymphocyte maturation." [HPO:curators]
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 HP:0000813 Bicornuate uterus 
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 HP:0001126 Cryptophthalmos "Cryptophthalmos is a condition of total absence of eyelids and the skin of forehead is continuous with that of cheek, in which the eyeball is completely concealed by the skin, which is stretched over the orbital cavity." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001362 Skull defect "A localized defect in the bone of the skull resulting from abnormal embryological development. The defect is covered by normal skin. In some cases, skull x-rays have shown underlying lytic bone lesions which have closed before the age of one year." [HPO:curators]
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 HP:0001522 Death in infancy 
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 HP:0001537 Umbilical hernia "Protrusion of abdominal contents through a defect in the abdominal wall musculature around the umbilicus. Skin and subcutaneous tissue overlie the defect." [HPO:curators]
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 HP:0001539 Omphalocele 
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 HP:0001551 Abnormality of the umbilicus "Abnormality of the umbilicus (also known as the belly button or the navel)." [HPO:curators]
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 HP:0001602 Laryngeal stenosis 
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 HP:0001607 Subglottic stenosis 
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 HP:0001627 Cardiac abnormality "An abnormality of the `heart` (FMA:7088)." [HPO:probinson]
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 HP:0001770 Toe syndactyly "Webbing or fusion of the toes, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the toes in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
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 HP:0002006 Facial cleft 
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 HP:0002023 Anal atresia "Congenital absence of the anus, i.e., the opening at the bottom end of the intestinal tract." [HPO:curators]
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 HP:0002025 Anal stenosis "Abnormal narrowing of the anal opening." [HPO:curators]
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 HP:0002084 Encephalocele 
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 HP:0002089 Pulmonary hypoplasia 
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 HP:0002101 Abnormal lung lobation "Defects in the formation of pulmonary lobules." [HPO:curators]
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 HP:0002223 Absent eyebrows 
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 HP:0002244 Abnormality of the small intestine 
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 HP:0002475 Meningomyelocele 
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 HP:0002536 Abnormal cortical gyration "An abnormality of the gyri (i.e., the ridges) of the cerebral cortex of the brain." [HPO:curators]
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 HP:0002777 Tracheal stenosis 
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 HP:0003183 Wide pubic symphysis "Abnormally increased width of the pubic symphysis is the midline cartilaginous joint uniting the superior rami of the left and right pubic bones." [HPO:curators]
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 HP:0003191 Notched nasal alae 
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 HP:0003422 Vertebral segmentation defects 
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 HP:0004112 Midline nasal groove "An abnormal groove on the midline of the nose that may extend to the nasal tip." [HPO:curators]
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 HP:0004378 Abnormality of the anus "Abnormality of the anus, i.e., the opening at the bottom end of the intestinal tract." [HPO:curators]
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 HP:0004397 Ectopic anus "Abnormal displacement or malposition of the anus." [HPO:curators]
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0005325 Unusual hairline with hair growth on temples extending to lateral eyebrow 
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 HP:0005352 Severe t-cell immunodeficiency 
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 HP:0005950 Partial laryngeal atresia 
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 HP:0006101 Finger syndactyly "Webbing or fusion of the fingers, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the fingers in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
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 HP:0006610 Wide intermamillary distance 
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 HP:0006714 Aplasia/Hypoplasia of the sternum 
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 HP:0007633 Bilateral microphthalmos "A developmental anomaly characterized by abnormal smallness of both eyes." [HPO:curators]
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 HP:0007925 Lacrimal duct aplasia or stenosis 
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 HP:0007957 Variable degree of corneal opacities 
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 HP:0007993 Absent or malformed lacrimal ducts 
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 HP:0008559 Hypoplastic superior helix 
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 HP:0008572 External ear malformation 
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 HP:0008609 Middle ear malformations 
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 HP:0008665 Hypertrophic clitoris 
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 HP:0008678 Renal hypoplasia/aplasia 
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 HP:0008736 Hypoplasia of penis 
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 HP:0008750 Laryngeal atresia 
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 HP:0009601 Aplasia/Hypoplasia of the thumb "Hypoplastic/small or absent thumb." [HPO:curators]
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 HP:0009767 Aplasia/Hypoplasia of the phalanges of the hand "Small or missing phalangeal bones of the fingers of the hand." [HPO:curators]
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 HP:0010297 Bifid tongue "Tongue with a median apical indentation or fork." [pmid:19125428]
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 HP:0010458 Female pseudohermaphroditism "Hermaphroditism refers to a discrepancy between the morphology of the gonads and that of the external genitalia. In female pseudohermaphroditism, the genotype is female (XX) and the gonads are ovaries, but the external genitalia are virilized." [HPO:curators]
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 HP:0010554 Cutaneous syndactyly of the fingers "Webbing or fusion of the fingers involving soft parts only." [HPO:curators]
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 HP:0010720 Abnormal hair growth pattern "An abnormality of the distribution of hair growth." [HPO:probinson]
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 HP:0030680 Abnormality of cardiovascular system morphology "Any structural anomaly of the heart and great vessels." []
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000120251 GRIA2 / P42262 / glutamate ionotropic receptor AMPA type subunit 2  / reaction
 ENSG00000155511 GRIA1 / P42261 / glutamate ionotropic receptor AMPA type subunit 1  / reaction
 ENSG00000152578 GRIA4 / P48058 / glutamate ionotropic receptor AMPA type subunit 4  / reaction
 ENSG00000183020 AP2A2 / O94973 / adaptor related protein complex 2 alpha 2 subunit  / reaction
 ENSG00000196961 AP2A1 / O95782 / adaptor related protein complex 2 alpha 1 subunit  / reaction
 ENSG00000125675 GRIA3 / P42263 / glutamate ionotropic receptor AMPA type subunit 3  / reaction
 ENSG00000042753 AP2S1 / P53680 / adaptor related protein complex 2 sigma 1 subunit  / reaction
 ENSG00000100151 PICK1 / Q9NRD5 / protein interacting with PRKCA 1  / reaction
 ENSG00000006125 AP2B1 / P63010 / adaptor related protein complex 2 beta 1 subunit  / reaction
 ENSG00000161203 AP2M1 / Q96CW1 / adaptor related protein complex 2 mu 1 subunit  / reaction






 

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