ENSG00000166664


Homo sapiens

Features
Gene ID: ENSG00000166664
  
Biological name :CHRFAM7A
  
Synonyms : CHRFAM7A / CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion / Q494W8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 15
Strand: -1
Band: q13.2
Gene start: 30357766
Gene end: 30393849
  
Corresponding Affymetrix probe sets: 210123_s_at (Human Genome U133 Plus 2.0 Array)   236385_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000455401
Ensembl peptide - ENSP00000299847
Ensembl peptide - ENSP00000380927
Ensembl peptide - ENSP00000385389
NCBI entrez gene - 89832     See in Manteia.
OMIM - 609756
RefSeq - XM_011522155
RefSeq - NM_139320
RefSeq - NM_148911
RefSeq - XM_005254750
RefSeq - XM_011522153
RefSeq Peptide - NP_683709
RefSeq Peptide - NP_647536
swissprot - H3BPP0
swissprot - Q494W8
swissprot - A0A0A6YYA8
Ensembl - ENSG00000166664
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 chrna7ENSDARG00000101702Danio rerio
 FO907089.1ENSDARG00000101522Danio rerio
 CHRNA7ENSGALG00000004096Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CHRNA7 / P36544 / cholinergic receptor nicotinic alpha 7 subunitENSG0000017534495
Q9GZZ6 / CHRNA10 / cholinergic receptor nicotinic alpha 10 subunitENSG0000012974934
CHRNA9 / Q9UGM1 / cholinergic receptor nicotinic alpha 9 subunitENSG0000017434333
CHRNB1 / P11230 / cholinergic receptor nicotinic beta 1 subunitENSG0000017017531
CHRND / Q07001 / cholinergic receptor nicotinic delta subunitENSG0000013590231
CHRNG / P07510 / cholinergic receptor nicotinic gamma subunitENSG0000019681130
CHRNE / Q04844 / cholinergic receptor nicotinic epsilon subunitENSG0000010855627
HTR3A / P46098 / 5-hydroxytryptamine receptor 3AENSG0000016673622
HTR3C / Q8WXA8 / 5-hydroxytryptamine receptor 3CENSG0000017808421
HTR3E / A5X5Y0 / 5-hydroxytryptamine receptor 3EENSG0000018603820
HTR3B / O95264 / 5-hydroxytryptamine receptor 3BENSG0000014930518
HTR3D / Q70Z44 / 5-hydroxytryptamine receptor 3DENSG0000018609016


Protein motifs (from Interpro)
Interpro ID Name
 IPR006029  Neurotransmitter-gated ion-channel transmembrane domain
 IPR006201  Neurotransmitter-gated ion-channel
 IPR006202  Neurotransmitter-gated ion-channel ligand-binding domain
 IPR018000  Neurotransmitter-gated ion-channel, conserved site
 IPR036719  Neurotransmitter-gated ion-channel transmembrane domain superfamily
 IPR036734  Neurotransmitter-gated ion-channel ligand-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0034220 ion transmembrane transport IEA
 biological_processGO:0034766 negative regulation of ion transmembrane transport IDA
 biological_processGO:1903049 negative regulation of acetylcholine-gated cation channel activity IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004888 transmembrane signaling receptor activity IEA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005230 extracellular ligand-gated ion channel activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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