ENSG00000182957


Homo sapiens

Features
Gene ID: ENSG00000182957
  
Biological name :SPATA13
  
Synonyms : Q96N96 / SPATA13 / spermatogenesis associated 13
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 13
Strand: 1
Band: q12.12
Gene start: 23979805
Gene end: 24307074
  
Corresponding Affymetrix probe sets: 1556601_a_at (Human Genome U133 Plus 2.0 Array)   1557470_at (Human Genome U133 Plus 2.0 Array)   225564_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000401605
Ensembl peptide - ENSP00000398560
Ensembl peptide - ENSP00000477296
Ensembl peptide - ENSP00000477304
Ensembl peptide - ENSP00000343631
Ensembl peptide - ENSP00000371527
Ensembl peptide - ENSP00000371542
Ensembl peptide - ENSP00000382830
Ensembl peptide - ENSP00000386471
Ensembl peptide - ENSP00000397498
NCBI entrez gene - 221178     See in Manteia.
OMIM - 613324
RefSeq - NM_001166271
RefSeq - NM_001286792
RefSeq - NM_001286793
RefSeq - NM_001286794
RefSeq - NM_001286795
RefSeq - NM_153023
RefSeq Peptide - NP_694568
RefSeq Peptide - NP_001159743
RefSeq Peptide - NP_001273721
RefSeq Peptide - NP_001273722
RefSeq Peptide - NP_001273723
RefSeq Peptide - NP_001273724
swissprot - Q5VX67
swissprot - Q96N96
swissprot - V9GZ16
swissprot - E9PFR9
swissprot - J3KQJ8
swissprot - A0A024RDM6
Ensembl - ENSG00000182957
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 spata13ENSDARG00000062837Danio rerio
 ENSGALG00000034674Gallus gallus
 Spata13ENSMUSG00000021990Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AL359736.1ENSG0000027316786
Q9NR80 / ARHGEF4 / Rho guanine nucleotide exchange factor 4ENSG0000013600229
O43307 / ARHGEF9 / Cdc42 guanine nucleotide exchange factor 9ENSG0000013108925
TIAM1 / Q13009 / T cell lymphoma invasion and metastasis 1ENSG0000015629916
TIAM2 / Q8IVF5 / T cell lymphoma invasion and metastasis 2ENSG0000014642616
PREX2 / Q70Z35 / phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2ENSG0000004688912
PREX1 / Q8TCU6 / phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1ENSG0000012412612
Q14155 / ARHGEF7 / Rho guanine nucleotide exchange factor 7ENSG0000010260611
VAV2 / P52735 / vav guanine nucleotide exchange factor 2ENSG0000016029310
VAV1 / P15498 / vav guanine nucleotide exchange factor 1ENSG0000014196810
Q15052 / ARHGEF6 / Rac/Cdc42 guanine nucleotide exchange factor 6ENSG0000012967510
VAV3 / Q9UKW4 / vav guanine nucleotide exchange factor 3ENSG000001342159


Protein motifs (from Interpro)
Interpro ID Name
 IPR000219  Dbl homology (DH) domain
 IPR001452  SH3 domain
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily
 IPR035899  Dbl homology (DH) domain superfamily
 IPR036028  SH3-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016477 cell migration IMP
 biological_processGO:0030032 lamellipodium assembly IMP
 biological_processGO:0030334 regulation of cell migration IMP
 biological_processGO:0035023 regulation of Rho protein signal transduction IEA
 biological_processGO:0046847 filopodium assembly IMP
 biological_processGO:0065009 regulation of molecular function IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030027 lamellipodium IEA
 cellular_componentGO:0030175 filopodium IEA
 cellular_componentGO:0032587 ruffle membrane IEA
 cellular_componentGO:0042995 cell projection IEA
 molecular_functionGO:0005085 guanyl-nucleotide exchange factor activity IMP
 molecular_functionGO:0005089 Rho guanyl-nucleotide exchange factor activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0030676 Rac guanyl-nucleotide exchange factor activity IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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