ENSGALG00000034674


Gallus gallus

Features
Gene ID: ENSGALG00000034674
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : AL359736.1 / Q96N96 / SPATA13 / spermatogenesis associated 13
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 177395491
Gene end: 177410045
  
Corresponding Affymetrix probe sets: Gga.7194.1.S1_at (Chicken Array)   GgaAffx.25172.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000057567
NCBI entrez gene - 418940     See in Manteia.
RefSeq - XM_015279130
RefSeq - XM_015279143
RefSeq - XM_015279147
RefSeq - XM_417134
RefSeq - XM_015279125
swissprot - A0A1D5PX73
Ensembl - ENSGALG00000034674
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 spata13ENSDARG00000062837Danio rerio
 AL359736.1ENSG00000273167Homo sapiens
 Q96N96ENSG00000182957Homo sapiens
 Spata13ENSMUSG00000021990Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ARHGEF4 / Rho guanine nucleotide exchange factor 4 / Q7TNR9* / Q9NR80*ENSGALG0000000219366
ARHGEF9 / Cdc42 guanine nucleotide exchange factor 9 / O43307* / Q3UTH8* / Rho guanine nucleotide exchange factor 9 *ENSGALG0000000760857
PREX1 / phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 / Q69ZK0* / Q8TCU6* / Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein *ENSGALG0000000462127
PREX2 / phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 / Q3LAC4* / Q70Z35* / Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 2 protein *ENSGALG0000004235426
VAV2 / guanine nucleotide exchange factor VAV2 / Q60992* / P52735* / vav 2 oncogene* / vav guanine nucleotide exchange factor 2*ENSGALG0000000269920
Q5ZLR6 / ARHGEF6 / Rho guanine nucleotide exchange factor 6 / Q15052* / Rac/Cdc42 guanine nucleotide exchange factor 6*ENSGALG0000000643920
ARHGEF7 / Rho guanine nucleotide exchange factor 7 / Q14155* / Q9ES28*ENSGALG0000003100920
TIAM2 / T cell lymphoma invasion and metastasis 2 / Q6ZPF3* / Q8IVF5* / T-lymphoma invasion and metastasis-inducing protein 2 *ENSGALG0000003600520
TIAM1 / T cell lymphoma invasion and metastasis 1 / Q13009*ENSGALG0000001584220
VAV3 / vav guanine nucleotide exchange factor 3 / Q9R0C8* / Q9UKW4* / vav 3 oncogene*ENSGALG0000003932719
ENSGALG000000018949
ENSGALG000000362530


Protein motifs (from Interpro)
Interpro ID Name
 IPR000219  Dbl homology (DH) domain
 IPR001452  SH3 domain
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0035023 regulation of Rho protein signal transduction IEA
 biological_processGO:0065009 regulation of molecular function IEA
 molecular_functionGO:0005089 Rho guanyl-nucleotide exchange factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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