ENSGALG00000015305


Gallus gallus

Features
Gene ID: ENSGALG00000015305
  
Biological name :NR2E1
  
Synonyms : NR2E1 / nuclear receptor subfamily 2 group E member 1
  
Possible biological names infered from orthology : Q64104 / Q9Y466
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 67649133
Gene end: 67664104
  
Corresponding Affymetrix probe sets: Gga.3535.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000036481
NCBI entrez gene - 396082     See in Manteia.
RefSeq - NM_205170
RefSeq Peptide - NP_990501
swissprot - F1NTE7
Ensembl - ENSGALG00000015305
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nr2e1ENSDARG00000017107Danio rerio
 NR2E1ENSG00000112333Homo sapiens
 Nr2e1ENSMUSG00000019803Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NR2E3 / photoreceptor-specific nuclear receptor / Q9QXZ7* / Q9Y5X4* / nuclear receptor subfamily 2 group E member 3*ENSGALG0000000209344
NR2F1 / nuclear receptor subfamily 2 group F member 1 / P10589*ENSGALG0000002790736
NR2F2 / COUP transcription factor 2 / P24468* / P43135* / nuclear receptor subfamily 2 group F member 2*ENSGALG0000000700035
NR2F6 / nuclear receptor subfamily 2 group F member 6 / P10588* / P43136*ENSGALG0000004301034
NR2C2 / nuclear receptor subfamily 2 group C member 2 / P49116* / P49117*ENSGALG0000000851933
NR2C1 / nuclear receptor subfamily 2 group C member 1 / P13056* / Q505F1*ENSGALG0000001132732
HNF4A / hepatocyte nuclear factor 4-alpha / P41235* / P49698*ENSGALG0000000428531
HNF4G / hepatocyte nuclear factor 4 gamma / Q14541*ENSGALG0000004262131
HNF4beta / hepatic nuclear factor 4beta ENSGALG0000000570830
RXRG / retinoic acid receptor RXR-gamma / P28705* / P48443* / retinoid X receptor gamma*ENSGALG0000004073030
RXRA / retinoid X receptor alpha / P19793* / P28700*ENSGALG0000004205515


Protein motifs (from Interpro)
Interpro ID Name
 IPR000536  Nuclear hormone receptor, ligand-binding domain
 IPR001628  Zinc finger, nuclear hormone receptor-type
 IPR001723  Nuclear hormone receptor
 IPR013088  Zinc finger, NHR/GATA-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0001662 behavioral fear response IEA
 biological_processGO:0002118 aggressive behavior IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007420 brain development IEA
 biological_processGO:0007601 visual perception IEA
 biological_processGO:0008284 positive regulation of cell proliferation IEA
 biological_processGO:0008347 glial cell migration IEA
 biological_processGO:0021542 dentate gyrus development IEA
 biological_processGO:0021764 amygdala development IEA
 biological_processGO:0021772 olfactory bulb development IEA
 biological_processGO:0021819 layer formation in cerebral cortex IEA
 biological_processGO:0021872 forebrain generation of neurons IEA
 biological_processGO:0021895 cerebral cortex neuron differentiation IEA
 biological_processGO:0021960 anterior commissure morphogenesis IEA
 biological_processGO:0021987 cerebral cortex development IEA
 biological_processGO:0030198 extracellular matrix organization IEA
 biological_processGO:0035019 somatic stem cell population maintenance IEA
 biological_processGO:0035176 social behavior IEA
 biological_processGO:0043010 camera-type eye development IEA
 biological_processGO:0043066 negative regulation of apoptotic process IEA
 biological_processGO:0043401 steroid hormone mediated signaling pathway IEA
 biological_processGO:0045165 cell fate commitment IEA
 biological_processGO:0045665 negative regulation of neuron differentiation IEA
 biological_processGO:0045766 positive regulation of angiogenesis IEA
 biological_processGO:0045787 positive regulation of cell cycle IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048712 negative regulation of astrocyte differentiation IEA
 biological_processGO:0048814 regulation of dendrite morphogenesis IEA
 biological_processGO:0051128 regulation of cellular component organization IEA
 biological_processGO:0060041 retina development in camera-type eye IEA
 biological_processGO:0060164 regulation of timing of neuron differentiation IEA
 biological_processGO:0060291 long-term synaptic potentiation IEA
 biological_processGO:0090049 regulation of cell migration involved in sprouting angiogenesis IEA
 biological_processGO:2000178 negative regulation of neural precursor cell proliferation IEA
 biological_processGO:2000179 positive regulation of neural precursor cell proliferation IEA
 biological_processGO:2000648 positive regulation of stem cell proliferation IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0003707 steroid hormone receptor activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0019899 enzyme binding IEA
 molecular_functionGO:0042826 histone deacetylase binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Nuclear Receptor transcription pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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