ENSGALG00000043010


Gallus gallus

Features
Gene ID: ENSGALG00000043010
  
Biological name :NR2F6
  
Synonyms : NR2F6 / nuclear receptor subfamily 2 group F member 6
  
Possible biological names infered from orthology : P10588 / P43136
  
Species: Gallus gallus
  
Chr. number: 28
Strand: -1
Band:
Gene start: 3385427
Gene end: 3391125
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000044103
NCBI entrez gene - 100859014     See in Manteia.
RefSeq - XM_015300096
swissprot - A0A1D5NUT5
Ensembl - ENSGALG00000043010
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nr2f6aENSDARG00000003607Danio rerio
 nr2f6bENSDARG00000003165Danio rerio
 NR2F6ENSG00000160113Homo sapiens
 Nr2f6ENSMUSG00000002393Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NR2F1 / nuclear receptor subfamily 2 group F member 1 / P10589*ENSGALG0000002790774
NR2F2 / COUP transcription factor 2 / P24468* / P43135* / nuclear receptor subfamily 2 group F member 2*ENSGALG0000000700074
RXRG / retinoic acid receptor RXR-gamma / P28705* / P48443* / retinoid X receptor gamma*ENSGALG0000004073039
NR2E3 / photoreceptor-specific nuclear receptor / Q9QXZ7* / Q9Y5X4* / nuclear receptor subfamily 2 group E member 3*ENSGALG0000000209339
NR2C2 / nuclear receptor subfamily 2 group C member 2 / P49116* / P49117*ENSGALG0000000851937
NR2C1 / nuclear receptor subfamily 2 group C member 1 / P13056* / Q505F1*ENSGALG0000001132737
HNF4A / hepatocyte nuclear factor 4-alpha / P41235* / P49698*ENSGALG0000000428536
NR2E1 / nuclear receptor subfamily 2 group E member 1 / Q64104* / Q9Y466*ENSGALG0000001530535
HNF4G / hepatocyte nuclear factor 4 gamma / Q14541*ENSGALG0000004262135
HNF4beta / hepatic nuclear factor 4beta ENSGALG0000000570834
RXRA / retinoid X receptor alpha / P19793* / P28700*ENSGALG0000004205517


Protein motifs (from Interpro)
Interpro ID Name
 IPR000536  Nuclear hormone receptor, ligand-binding domain
 IPR001628  Zinc finger, nuclear hormone receptor-type
 IPR001723  Nuclear hormone receptor
 IPR003068  Transcription factor COUP
 IPR013088  Zinc finger, NHR/GATA-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0030522 intracellular receptor signaling pathway IEA
 biological_processGO:0043153 entrainment of circadian clock by photoperiod IEA
 biological_processGO:0043401 steroid hormone mediated signaling pathway IEA
 biological_processGO:0048666 neuron development IEA
 biological_processGO:0050965 detection of temperature stimulus involved in sensory perception of pain IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000980 RNA polymerase II distal enhancer sequence-specific DNA binding IEA
 molecular_functionGO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0003707 steroid hormone receptor activity IEA
 molecular_functionGO:0004879 nuclear receptor activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Nuclear Receptor transcription pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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