ENSGALG00000017006


Gallus gallus

Features
Gene ID: ENSGALG00000017006
  
Biological name :SETDB2
  
Synonyms : SETDB2 / SET domain bifurcated 2
  
Possible biological names infered from orthology : Q8C267 / Q96T68
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 169208519
Gene end: 169226576
  
Corresponding Affymetrix probe sets: GgaAffx.10885.1.S1_at (Chicken Array)   GgaAffx.10885.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000027418
NCBI entrez gene - 418866     See in Manteia.
RefSeq - XM_004938710
RefSeq - XM_417061
swissprot - F1NV79
Ensembl - ENSGALG00000017006
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q96T68ENSG00000136169Homo sapiens
 Q8C267ENSMUSG00000071350Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SETDB1 / SET domain bifurcated 1 / Q15047*ENSGALG0000002405126
EHMT1 / histone-lysine N-methyltransferase EHMT1 / Q5DW34* / Q9H9B1* / euchromatic histone lysine methyltransferase 1*ENSGALG0000003367818
SETD2 / SET domain containing 2 / E9Q5F9* / Q9BYW2* / Histone-lysine N-methyltransferase SETD2 *ENSGALG0000004205113
NSD2 / nuclear receptor binding SET domain protein 2 / O96028* / Q8BVE8* / Histone-lysine N-methyltransferase NSD2 *ENSGALG0000001570512
NSD3 / nuclear receptor binding SET domain protein 3 / Q6P2L6* / Q9BZ95* / Histone-lysine N-methyltransferase NSD3 *ENSGALG0000000329912
NSD1 / nuclear receptor binding SET domain protein 1 / Q96L73*ENSGALG0000000297112
Q5F3W5 / SUV39H2 / Histone-lysine N-methyltransferase SUV39H2 / Q9H5I1* / suppressor of variegation 3-9 2* / suppressor of variegation 3-9 homolog 2*ENSGALG0000001392011
EZH1 / enhancer of zeste 1 polycomb repressive complex 2 subunit / P70351* / Q92800* / Histone-lysine N-methyltransferase EZH1 *ENSGALG0000000306811
EZH2 / enhancer of zeste 2 polycomb repressive complex 2 subunit / Q15910* / Q61188* / Histone-lysine N-methyltransferase EZH2 *ENSGALG0000004339910
ASH1L / ASH1 like histone lysine methyltransferase / Q99MY8* / Q9NR48* / Histone-lysine N-methyltransferase ASH1L *ENSGALG0000001463810
SETBP1 / SET binding protein 1 / Q9Y6X0* / Q9Z180* / SET-binding protein *ENSGALG0000003677510


Protein motifs (from Interpro)
Interpro ID Name
 IPR001214  SET domain
 IPR001739  Methyl-CpG DNA binding
 IPR007728  Pre-SET domain
 IPR016177  DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000278 mitotic cell cycle IEA
 biological_processGO:0007059 chromosome segregation IEA
 biological_processGO:0034968 histone lysine methylation IEA
 biological_processGO:0051567 histone H3-K9 methylation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0018024 histone-lysine N-methyltransferase activity IEA
 molecular_functionGO:0046974 histone methyltransferase activity (H3-K9 specific) IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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