ENSGALG00000028407


Gallus gallus

Features
Gene ID: ENSGALG00000028407
  
Biological name :GDF9
  
Synonyms : GDF9 / growth differentiation factor 9
  
Possible biological names infered from orthology : O60383 / Q07105
  
Species: Gallus gallus
  
Chr. number: 13
Strand: 1
Band:
Gene start: 17156641
Gene end: 17159344
  
Corresponding Affymetrix probe sets: Gga.13143.1.S1_at (Chicken Array)   GgaAffx.20103.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000039098
NCBI entrez gene - 404533     See in Manteia.
RefSeq - NM_206988
RefSeq Peptide - NP_996871
swissprot - Q6Q247
Ensembl - ENSGALG00000028407
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gdf9ENSDARG00000003229Danio rerio
 GDF9ENSG00000164404Homo sapiens
 Gdf9ENSMUSG00000018238Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BMP15 / bone morphogenetic protein 15 precursor ENSGALG0000000474226
BMP3 / bone morphogenetic protein 3 precursor / P12645* / Q8BHE5* / Bone morphotic protein 3 * / bone morphogenetic protein 3*ENSGALG0000003505215
GDF10 / growth differentiation factor 10 / P55107* / P97737*ENSGALG0000000598514
GDF3 / embryonic growth/differentiation factor 1 / GDF1* / CERS1* / P27545* / P27544* / Q9NR23* / Q07104* / P20863* / P27539* / ceramide synthase 1* / growth differentiation factor 3* / gr...ENSGALG0000000316114
INHBA / inhibin beta A chain precursor / P08476* / Q04998* / Inhibin beta A chain * / inhibin beta A subunit*ENSGALG0000003461613
INHBB / inhibin beta B chain precursor / P09529* / Q04999* / Inhibin beta B chain * / inhibin beta B subunit*ENSGALG0000002877013
TGFB2 / P27090* / P61812* / transforming growth factor beta 2* / Transforming growth factor beta-2 Latency-associated peptide*ENSGALG0000000961212
NODAL* / P43021* / Q96S42* / nodal growth differentiation factor*ENSGALG0000000320912
TGFB3 / transforming growth factor beta 3 / P10600*ENSGALG0000001034612
GDF8 / O42220 / Growth/differentiation factor 8 / MSTN* / O08689* / O14793* / myostatin*ENSGALG0000003945811
GDF15* / Q99988* / Q9Z0J7* / growth differentiation factor 15* / Mus musculus growth differentiation factor 15 (Gdf15), transcript variant 2, mRNA.*ENSGALG000000462787


Protein motifs (from Interpro)
Interpro ID Name
 IPR001839  Transforming growth factor-beta, C-terminal
 IPR015615  Transforming growth factor-beta-related
 IPR015617  Growth differentiation factor-9
 IPR017948  Transforming growth factor beta, conserved site
 IPR029034  Cystine-knot cytokine


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001555 oocyte growth IEA
 biological_processGO:0008284 positive regulation of cell proliferation IEA
 biological_processGO:0010469 regulation of signaling receptor activity IEA
 biological_processGO:0010862 positive regulation of pathway-restricted SMAD protein phosphorylation IBA
 biological_processGO:0030308 negative regulation of cell growth IEA
 biological_processGO:0030509 BMP signaling pathway IBA
 biological_processGO:0042981 regulation of apoptotic process IBA
 biological_processGO:0043408 regulation of MAPK cascade IBA
 biological_processGO:0048468 cell development IBA
 biological_processGO:0060395 SMAD protein signal transduction IBA
 biological_processGO:2000870 regulation of progesterone secretion IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0005125 cytokine activity IBA
 molecular_functionGO:0005160 transforming growth factor beta receptor binding IBA
 molecular_functionGO:0008083 growth factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr