ENSGALG00000038753


Gallus gallus

Features
Gene ID: ENSGALG00000038753
  
Biological name :SAR1B
  
Synonyms : GTP-binding protein SAR1b / SAR1B
  
Possible biological names infered from orthology : Q9CQC9 / Q9Y6B6 / secretion associated Ras related GTPase 1B
  
Species: Gallus gallus
  
Chr. number: 13
Strand: 1
Band:
Gene start: 15826332
Gene end: 15838644
  
Corresponding Affymetrix probe sets: Gga.17371.1.S1_at (Chicken Array)   Gga.6296.1.S1_at (Chicken Array)   GgaAffx.12227.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000049274
Ensembl peptide - ENSGALP00000058504
Ensembl peptide - ENSGALP00000056196
Ensembl peptide - ENSGALP00000055599
Ensembl peptide - ENSGALP00000043520
NCBI entrez gene - 416314     See in Manteia.
RefSeq - NM_001030621
RefSeq - XM_015294016
RefSeq Peptide - NP_001025792
swissprot - A0A1D5PZT7
swissprot - A0A1D5P973
swissprot - A0A1D5NT67
Ensembl - ENSGALG00000038753
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sar1bENSDARG00000103403Danio rerio
 SAR1BENSG00000152700Homo sapiens
 Sar1bENSMUSG00000020386Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SAR1A / secretion associated Ras related GTPase 1A / Q9NR31*ENSGALG0000000443192


Protein motifs (from Interpro)
Interpro ID Name
 IPR005225  Small GTP-binding protein domain
 IPR006687  Small GTPase superfamily, SAR1-type
 IPR006689  Small GTPase superfamily, ARF/SAR type
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
Cargo concentration in the ER
Chylomicron assembly
Antigen Presentation: Folding, assembly and peptide loading of class I MHC


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000008419 SEC13 / P55735* / Q9D1M0* / SEC13 homolog, nuclear pore and COPII coat complex component*  / complex / reaction
 ENSGALG00000004594 CD74 / CD74 molecule / P04233* / P04441* / CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)*  / complex
 ENSGALG00000006417 SEC24A / Gallus gallus SEC24 homolog A, COPII coat complex component (SEC24A), mRNA. / O95486* / Q3U2P1* / Protein transport protein Sec24A * / SEC24 homolog A, COPII coat complex component*  / complex / reaction
 ENSGALG00000011998 SEC24D / SEC24 homolog D, COPII coat complex component / O94855* / Sec24 related gene family, member D (S. cerevisiae)*  / reaction / complex
 ENSGALG00000002364 SEC16A / SEC16 homolog A, endoplasmic reticulum export factor / O15027*  / reaction / complex
 ENSGALG00000040484 SEC31A / protein transport protein Sec31A / O94979* / Q3UPL0* / SEC31 homolog A, COPII coat complex component*  / complex / reaction
 ENSGALG00000010150 SEC23A / Sec23 homolog A, coat complex II component / Q01405* / Q15436* / Protein transport protein Sec23A *  / complex / reaction
 ENSGALG00000004424 SEC16B / protein transport protein Sec16B / Q91XT4* / Q96JE7* / SEC16 homolog B, endoplasmic reticulum export factor*  / reaction / complex
 ENSGALG00000015299 TFG / TRK-fused gene / Q92734*  / reaction / complex
 ENSGALG00000002160 B2M / P21611 / Beta-2-microglobulin / P01887* / P61769*  / complex
 ENSGALG00000039704 Q5ZJW4 / SEC22B / Vesicle-trafficking protein SEC22b / O08547* / O75396* / SEC22 homolog B, vesicle trafficking protein (gene/pseudogene)*  / reaction / complex






 

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