ENSGALG00000041080


Gallus gallus

Features
Gene ID: ENSGALG00000041080
  
Biological name :CHD7
  
Synonyms : CHD7 / Chromodomain-helicase-DNA-binding protein 7 / Q06A37
  
Possible biological names infered from orthology : A2AJK6 / Q9P2D1
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 113278112
Gene end: 113366083
  
Corresponding Affymetrix probe sets: Gga.17320.1.S1_at (Chicken Array)   Gga.7719.1.S1_s_at (Chicken Array)   GgaAffx.20690.1.S1_s_at (Chicken Array)   GgaAffx.24689.1.S1_at (Chicken Array)   GgaAffx.9854.1.S1_at (Chicken Array)   GgaAffx.9854.2.S1_s_at (Chicken Array)   GgaAffx.9854.3.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000056921
NCBI entrez gene - 421140     See in Manteia.
RefSeq - NM_001077586
RefSeq Peptide - NP_001071054
swissprot - Q06A37
Ensembl - ENSGALG00000041080
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 chd7ENSDARG00000075211Danio rerio
 CHD7ENSG00000171316Homo sapiens
 Chd7ENSMUSG00000041235Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CHD9 / chromodomain helicase DNA binding protein 9 / Q3L8U1* / Q8BYH8*ENSGALG0000003917845
CHD4 / chromodomain helicase DNA binding protein 4 / Q14839* / Q6PDQ2* / Mus musculus chromodomain helicase DNA binding protein 4 (Chd4), mRNA.*ENSGALG0000001356516
CHD2 / E9PZM4* / O14647* / AC013394.1* / chromodomain helicase DNA binding protein 2*ENSGALG0000000694915
CHD1* / O14646* / P40201* / Q9CQS5* / chromodomain helicase DNA binding protein 1*ENSGALG0000003132714
CHD1Z / chromodomain-helicase-DNA-binding protein 1 / CHD1* / O14646* / P40201* / Q9CQS5*ENSGALG0000001464214
CHD5* / A2A8L1* / Q8TDI0* / chromodomain helicase DNA binding protein 5*ENSGALG0000000074714
CHD6* / A3KFM7* / Q8TD26* / chromodomain helicase DNA binding protein 6*ENSGALG0000003241710
CHD5* / A2A8L1* / Q8TDI0* / chromodomain helicase DNA binding protein 5*ENSGALG000000400772


Protein motifs (from Interpro)
Interpro ID Name
 IPR000330  SNF2-related, N-terminal domain
 IPR000953  Chromo/chromo shadow domain
 IPR001650  Helicase, C-terminal
 IPR006576  BRK domain
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR016197  Chromo-like domain superfamily
 IPR023780  Chromo domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001501 skeletal system development IEA
 biological_processGO:0001568 blood vessel development IEA
 biological_processGO:0001701 in utero embryonic development IEA
 biological_processGO:0001974 blood vessel remodeling IEA
 biological_processGO:0003007 heart morphogenesis IEA
 biological_processGO:0003222 ventricular trabecula myocardium morphogenesis IEA
 biological_processGO:0003226 right ventricular compact myocardium morphogenesis IEA
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006338 chromatin remodeling IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0007417 central nervous system development IEA
 biological_processGO:0007512 adult heart development IEA
 biological_processGO:0007605 sensory perception of sound IEA
 biological_processGO:0007626 locomotory behavior IEA
 biological_processGO:0007628 adult walking behavior IEA
 biological_processGO:0008015 blood circulation IEA
 biological_processGO:0010880 regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum IEA
 biological_processGO:0021545 cranial nerve development IEA
 biological_processGO:0021553 olfactory nerve development IEA
 biological_processGO:0021772 olfactory bulb development IEA
 biological_processGO:0030217 T cell differentiation IEA
 biological_processGO:0030540 female genitalia development IEA
 biological_processGO:0035116 embryonic hindlimb morphogenesis IEA
 biological_processGO:0035904 aorta development IEA
 biological_processGO:0035909 aorta morphogenesis IEA
 biological_processGO:0036302 atrioventricular canal development IEA
 biological_processGO:0040018 positive regulation of multicellular organism growth IEA
 biological_processGO:0042048 olfactory behavior IEA
 biological_processGO:0042471 ear morphogenesis IEA
 biological_processGO:0042472 inner ear morphogenesis IEA
 biological_processGO:0043010 camera-type eye development IEA
 biological_processGO:0043584 nose development IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048752 semicircular canal morphogenesis IEA
 biological_processGO:0048771 tissue remodeling IEA
 biological_processGO:0048806 genitalia development IEA
 biological_processGO:0048844 artery morphogenesis IEA
 biological_processGO:0050767 regulation of neurogenesis IEA
 biological_processGO:0050890 cognition IEA
 biological_processGO:0060021 roof of mouth development IEA
 biological_processGO:0060041 retina development in camera-type eye IEA
 biological_processGO:0060123 regulation of growth hormone secretion IEA
 biological_processGO:0060173 limb development IEA
 biological_processGO:0060324 face development IEA
 biological_processGO:0060384 innervation IEA
 biological_processGO:0060411 cardiac septum morphogenesis IEA
 biological_processGO:0060429 epithelium development IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016817 hydrolase activity, acting on acid anhydrides IEA
 molecular_functionGO:1990841 promoter-specific chromatin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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