ENSGALG00000043596


Gallus gallus

Features
Gene ID: ENSGALG00000043596
  
Biological name :SNED1
  
Synonyms : SNED1 / sushi, nidogen and EGF like domains 1
  
Possible biological names infered from orthology : Q8TER0
  
Species: Gallus gallus
  
Chr. number: 9
Strand: 1
Band:
Gene start: 4882254
Gene end: 4900852
  
Corresponding Affymetrix probe sets: GgaAffx.3757.1.S1_at (Chicken Array)   GgaAffx.3761.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000048195
NCBI entrez gene - 424846     See in Manteia.
RefSeq - XM_015277089
swissprot - A0A1D5P671
Ensembl - ENSGALG00000043596
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sned1ENSDARG00000044433Danio rerio
 SNED1ENSG00000162804Homo sapiens
 Sned1ENSMUSG00000047793Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NOTCH1 / P46531* / Q01705* / Neurogenic locus notch homolog protein 1 Notch 1 extracellular truncation Notch 1 intracellular domain*ENSGALG0000000237523
NOTCH2 / Q04721*ENSGALG0000000292222
JAG2 / jagged 2 / Q9QYE5* / Q9Y219* / Protein jagged-2 *ENSGALG0000001169616
JAG1 / jagged 1 / P78504* / Q9QXX0* / Protein jagged-1 *ENSGALG0000000902015
DLL1 / delta-like protein 1 precursor / O00548* / Q61483* / delta like canonical Notch ligand 1* / Delta-like protein 1 Dll1-soluble form Dll1-derived cell-associated form Dll1-intracellular form*ENSGALG0000001118210
ENSGALG000000161839
DLL4 / delta like canonical Notch ligand 4 / Q9JI71* / Q9NR61* / Delta-like protein 4 *ENSGALG000000085148
ENSGALG000000399976


Protein motifs (from Interpro)
Interpro ID Name
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000436  Sushi/SCR/CCP domain
 IPR000742  EGF-like domain
 IPR001881  EGF-like calcium-binding domain
 IPR003886  NIDO domain
 IPR003961  Fibronectin type III
 IPR009030  Growth factor receptor cysteine-rich domain superfamily
 IPR013032  EGF-like, conserved site
 IPR013783  Immunoglobulin-like fold
 IPR018097  EGF-like calcium-binding, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007160 cell-matrix adhesion IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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