ENSMUSG00000000627


Mus musculus

Features
Gene ID: ENSMUSG00000000627
  
Biological name :Sema4f
  
Synonyms : Q9Z123 / Sema4f / Semaphorin-4F
  
Possible biological names infered from orthology : O95754 / ssemaphorin 4F
  
Species: Mus musculus
  
Chr. number: 6
Strand: -1
Band: C3
Gene start: 82911885
Gene end: 82939769
  
Corresponding Affymetrix probe sets: 10545608 (MoGene1.0st)   1419328_at (Mouse Genome 430 2.0 Array)   1439768_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000000641
Ensembl peptide - ENSMUSP00000144745
NCBI entrez gene - 20355     See in Manteia.
MGI - MGI:1340055
RefSeq - XM_011241264
RefSeq - NM_001308374
RefSeq - NM_011350
RefSeq Peptide - NP_001295303
RefSeq Peptide - NP_035480
swissprot - Q9Z123
swissprot - A0A0N4SUN0
Ensembl - ENSMUSG00000000627
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SEMA4FENSDARG00000100308Danio rerio
 O95754ENSG00000135622Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q62179 / Sema4b / Semaphorin-4B ENSMUSG0000003053934
O09126 / Sema4d / Semaphorin-4D / Q92854*ENSMUSG0000002145132
Q64151 / Sema4c / Semaphorin-4C / Q9C0C4*ENSMUSG0000002612132
Q9WUH7 / Sema4g / Semaphorin-4G / Q9NTN9*ENSMUSG0000002520732
Q4LFA9 / Sema3g / Semaphorin-3G / Q9NS98*ENSMUSG0000002190428
Sema3b / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B / Q13214* / semaphorin 3B*ENSMUSG0000005796928
Q8BH34 / Sema3d / Semaphorin-3D / O95025*ENSMUSG0000004025427
O08665 / Sema3a / Semaphorin-3A / Q14563*ENSMUSG0000002888327
Q62178 / Sema4a / Semaphorin-4A / Q9H3S1*ENSMUSG0000002806427
P70275 / Sema3e / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E / O15041* / semaphorin 3E*ENSMUSG0000006353125
O88632 / Sema3f / Semaphorin-3F / Q13275*ENSMUSG0000003468425
Q62181 / Sema3c / Semaphorin-3C / Q99985*ENSMUSG0000002878024


Protein motifs (from Interpro)
Interpro ID Name
 IPR001627  Sema domain
 IPR002165  Plexin repeat
 IPR015512  Semaphorin 4F
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR016201  PSI domain
 IPR027231  Semaphorin
 IPR036352  Sema domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0007411 axon guidance IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0030517 negative regulation of axon extension IEA
 biological_processGO:0031290 retinal ganglion cell axon guidance IEA
 biological_processGO:0050919 negative chemotaxis IBA
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane ISO
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0045211 postsynaptic membrane IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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