Manteia

ENSMUSG00000020455

Mus musculus

Features

Gene ID:	ENSMUSG00000020455

Biological name :	Trim11

Synonyms :	E3 ubiquitin-protein ligase TRIM11 / Q99PQ2 / Trim11

Possible biological names infered from orthology :	Q96F44 / tripartite motif containing 11

Species:	Mus musculus

Chr. number:	11
Strand:	1
Band:	B1.3
Gene start:	58978093
Gene end:	58991458

Corresponding Affymetrix probe sets:	10376461 (MoGene1.0st) 1419630_a_at (Mouse Genome 430 2.0 Array)

Cross references:	Ensembl peptide - ENSMUSP00000104438 Ensembl peptide - ENSMUSP00000090749 Ensembl peptide - ENSMUSP00000104437 NCBI entrez gene - 94091 See in Manteia. MGI - MGI:2137355 RefSeq - NM_001290988 RefSeq - NM_053168 RefSeq Peptide - NP_001277917 RefSeq Peptide - NP_444398 swissprot - A2AB83 swissprot - Q99PQ2 Ensembl - ENSMUSG00000020455

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
Q96F44	ENSG00000154370	Homo sapiens

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
Q7TPM3 / Trim17 / E3 ubiquitin-protein ligase TRIM17 / Q9Y577* / tripartite motif containing 17*	ENSMUSG00000036964	43
Trim39 / tripartite motif-containing 39 / Q9HCM9* / TRIM39-RPP21* / TRIM39-RPP21 readthrough*	ENSMUSG00000045409	41
Q5NCC9 / Trim58 / tripartite motif-containing 58 / Q8NG06*	ENSMUSG00000037124	41
Trim68 / tripartite motif-containing 68 / Q6AZZ1*	ENSMUSG00000073968	40
Trim21 / tripartite motif-containing 21 / P19474*	ENSMUSG00000030966	35
Trim6 / Q8BGE7 / Tripartite motif-containing protein 6 / Q9C030* / tripartite motif containing 6*	ENSMUSG00000072244	34
Trim34b / TRIM34* / Q9BYJ4* / TRIM6-TRIM34* / TRIM6-TRIM34 readthrough* / tripartite motif containing 34*	ENSMUSG00000090215	32
Trim38 / tripartite motif-containing 38 / O00635*	ENSMUSG00000064140	31
Q3UWZ0 / Trim75 / tripartite motif-containing 75 / A6NK02* / TRIM75P* / tripartite motif containing 75, pseudogene*	ENSMUSG00000071089	31
Trim34a / tripartite motif-containing 34A / TRIM34* / Q9BYJ4* / TRIM6-TRIM34* / TRIM6-TRIM34 readthrough* / tripartite motif containing 34*	ENSMUSG00000056144	31
Trim12c / tripartite motif-containing 12C / TRIM5* / Q9C035* / tripartite motif containing 5*	ENSMUSG00000057143	30
Trim5 / Q9C035* / tripartite motif containing 5*	ENSMUSG00000060441	30
Trim30c / TRIM5* / Q9C035* / tripartite motif containing 5*	ENSMUSG00000078616	30
P15533 / Trim30a / Mus musculus tripartite motif-containing 30A (Trim30a), transcript variant 2, mRNA. / TRIM5* / Q9C035* / tripartite motif containing 5*	ENSMUSG00000030921	29
Trim30d / tripartite motif-containing 30D / TRIM5* / Q9C035* / tripartite motif containing 5*	ENSMUSG00000057596	28
Q8VI40 / Trim60 / tripartite motif-containing 60 / Q495X7*	ENSMUSG00000053490	28
Trim61 / tripartite motif-containing 61	ENSMUSG00000109718	27
Q99PQ1 / Trim12a / Tripartite motif-containing protein 12A / TRIM5* / Q9C035* / tripartite motif containing 5*	ENSMUSG00000066258	18

Protein motifs (from Interpro)

Interpro ID	Name
IPR000315	B-box-type zinc finger
IPR001841	Zinc finger, RING-type
IPR001870	B30.2/SPRY domain
IPR003877	SPRY domain
IPR003879	Butyrophylin-like, SPRY domain
IPR006574	SPRY-associated
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR013320	Concanavalin A-like lectin/glucanase domain superfamily
IPR017907	Zinc finger, RING-type, conserved site

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0016567	protein ubiquitination	IEA
biological_process	GO:0032897	negative regulation of viral transcription	ISO
biological_process	GO:0045087	innate immune response	ISO
biological_process	GO:0045892	negative regulation of transcription, DNA-templated	IDA
biological_process	GO:0046597	negative regulation of viral entry into host cell	IDA
biological_process	GO:0046598	positive regulation of viral entry into host cell	IDA
biological_process	GO:0050768	negative regulation of neurogenesis	IMP
biological_process	GO:0051607	defense response to virus	IEA
biological_process	GO:1902187	negative regulation of viral release from host cell	IDA
cellular_component	GO:0005622	intracellular	IEA
cellular_component	GO:0005634	nucleus	ISO
cellular_component	GO:0005737	cytoplasm	IEA
cellular_component	GO:0005829	cytosol	ISO
molecular_function	GO:0004842	ubiquitin-protein transferase activity	IDA
molecular_function	GO:0005515	protein binding	IPI
molecular_function	GO:0008134	transcription factor binding	IPI
molecular_function	GO:0008270	zinc ion binding	IEA
molecular_function	GO:0016740	transferase activity	IEA
molecular_function	GO:0019904	protein domain specific binding	IPI
molecular_function	GO:0046872	metal ion binding	IEA
molecular_function	GO:0061630	ubiquitin protein ligase activity	IDA

Pathways (from Reactome)

Pathway description

Antigen processing: Ubiquitination & Proteasome degradation

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr