ENSMUSG00000053490


Mus musculus

Features
Gene ID: ENSMUSG00000053490
  
Biological name :Trim60
  
Synonyms : Q8VI40 / Trim60 / tripartite motif-containing 60
  
Possible biological names infered from orthology : Q495X7
  
Species: Mus musculus
  
Chr. number: 8
Strand: -1
Band: B3.1
Gene start: 64999307
Gene end: 65018584
  
Corresponding Affymetrix probe sets: 10578941 (MoGene1.0st)   1425647_at (Mouse Genome 430 2.0 Array)   1425648_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000040299
NCBI entrez gene - 234329     See in Manteia.
MGI - MGI:2387430
RefSeq - NM_153097
RefSeq Peptide - NP_694737
swissprot - Q8VI40
Ensembl - ENSMUSG00000053490
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000038146Gallus gallus
 Q495X7ENSG00000176979Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q3UWZ0 / Trim75 / tripartite motif-containing 75 / A6NK02* / TRIM75P* / tripartite motif containing 75, pseudogene*ENSMUSG0000007108936
Trim61 / tripartite motif-containing 61ENSMUSG0000010971835
Trim39 / tripartite motif-containing 39 / Q9HCM9* / TRIM39-RPP21* / TRIM39-RPP21 readthrough*ENSMUSG0000004540933
Q5NCC9 / Trim58 / tripartite motif-containing 58 / Q8NG06*ENSMUSG0000003712430
Trim68 / tripartite motif-containing 68 / Q6AZZ1*ENSMUSG0000007396829
Q99PQ2 / Trim11 / E3 ubiquitin-protein ligase TRIM11 / Q96F44* / tripartite motif containing 11*ENSMUSG0000002045529
Trim21 / tripartite motif-containing 21 / P19474*ENSMUSG0000003096627
Trim34b / TRIM34* / Q9BYJ4* / TRIM6-TRIM34* / TRIM6-TRIM34 readthrough* / tripartite motif containing 34*ENSMUSG0000009021527
Trim6 / Q8BGE7 / Tripartite motif-containing protein 6 / Q9C030* / tripartite motif containing 6*ENSMUSG0000007224427
Q7TPM3 / Trim17 / E3 ubiquitin-protein ligase TRIM17 / Q9Y577* / tripartite motif containing 17*ENSMUSG0000003696427
Trim34a / tripartite motif-containing 34A / TRIM34* / Q9BYJ4* / TRIM6-TRIM34* / TRIM6-TRIM34 readthrough* / tripartite motif containing 34*ENSMUSG0000005614426
Trim38 / tripartite motif-containing 38 / O00635*ENSMUSG0000006414024
P15533 / Trim30a / Mus musculus tripartite motif-containing 30A (Trim30a), transcript variant 2, mRNA. / TRIM5* / Q9C035* / tripartite motif containing 5*ENSMUSG0000003092124
Trim5 / Q9C035* / tripartite motif containing 5*ENSMUSG0000006044124
Trim12c / tripartite motif-containing 12C / TRIM5* / Q9C035* / tripartite motif containing 5*ENSMUSG0000005714324
Trim30c / TRIM5* / Q9C035* / tripartite motif containing 5*ENSMUSG0000007861624
Trim30d / tripartite motif-containing 30D / TRIM5* / Q9C035* / tripartite motif containing 5*ENSMUSG0000005759623
Q99PQ1 / Trim12a / Tripartite motif-containing protein 12A / TRIM5* / Q9C035* / tripartite motif containing 5*ENSMUSG0000006625813


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR017907  Zinc finger, RING-type, conserved site
 IPR035786  TRIM60, PRY/SPRY domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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