ENSG00000176979


Homo sapiens

Features
Gene ID: ENSG00000176979
  
Biological name :TRIM60
  
Synonyms : Q495X7 / TRIM60 / tripartite motif containing 60
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: 1
Band: q32.3
Gene start: 165031953
Gene end: 165041744
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSP00000426496
Ensembl peptide - ENSP00000343765
Ensembl peptide - ENSP00000421142
Ensembl peptide - ENSP00000421784
NCBI entrez gene - 166655     See in Manteia.
RefSeq - XM_011531683
RefSeq - NM_001258025
RefSeq - NM_152620
RefSeq Peptide - NP_001244954
RefSeq Peptide - NP_689833
swissprot - Q495X7
swissprot - D6RAS2
Ensembl - ENSG00000176979
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000038146Gallus gallus
 Q8VI40ENSMUSG00000053490Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
A6NK02 / TRIM75P / tripartite motif containing 75, pseudogeneENSG0000025037446
Q9HCM9 / TRIM39 / tripartite motif containing 39ENSG0000020459944
Q8NG06 / TRIM58 / tripartite motif containing 58ENSG0000016272235
TRIM39-RPP21 / TRIM39-RPP21 readthroughENSG0000024816735
P19474 / TRIM21 / tripartite motif containing 21ENSG0000013210935
Q6AZZ1 / TRIM68 / tripartite motif containing 68ENSG0000016733334
Q96F44 / TRIM11 / tripartite motif containing 11ENSG0000015437034
TRIM6-TRIM34 / TRIM6-TRIM34 readthroughENSG0000025858833
TRIM4 / Q9C037 / tripartite motif containing 4ENSG0000014683332
Q9Y577 / TRIM17 / tripartite motif containing 17ENSG0000016293132
O00635 / TRIM38 / tripartite motif containing 38ENSG0000011234331
TRIM6 / Q9C030 / tripartite motif containing 6ENSG0000012123630
Q9BYJ4 / TRIM34 / tripartite motif containing 34ENSG0000025865930
TRIM5 / Q9C035 / tripartite motif containing 5ENSG0000013225628
Q8IYM9 / TRIM22 / tripartite motif containing 22ENSG0000013227428


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR017907  Zinc finger, RING-type, conserved site
 IPR035786  TRIM60, PRY/SPRY domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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