ENSG00000154370


Homo sapiens

Features
Gene ID: ENSG00000154370
  
Biological name :TRIM11
  
Synonyms : Q96F44 / TRIM11 / tripartite motif containing 11
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: q42.13
Gene start: 228393673
Gene end: 228406840
  
Corresponding Affymetrix probe sets: 226566_at (Human Genome U133 Plus 2.0 Array)   238797_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000355660
Ensembl peptide - ENSP00000473574
Ensembl peptide - ENSP00000473579
Ensembl peptide - ENSP00000284551
Ensembl peptide - ENSP00000473360
NCBI entrez gene - 81559     See in Manteia.
OMIM - 607868
RefSeq - XM_017002412
RefSeq - NM_145214
RefSeq - XM_011544285
RefSeq Peptide - NP_660215
swissprot - R4GMV1
swissprot - R4GNB9
swissprot - R4GNC3
swissprot - Q96F44
Ensembl - ENSG00000154370
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q99PQ2ENSMUSG00000020455Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9Y577 / TRIM17 / tripartite motif containing 17ENSG0000016293147
Q8NG06 / TRIM58 / tripartite motif containing 58ENSG0000016272244
Q9HCM9 / TRIM39 / tripartite motif containing 39ENSG0000020459943
P19474 / TRIM21 / tripartite motif containing 21ENSG0000013210942
Q6AZZ1 / TRIM68 / tripartite motif containing 68ENSG0000016733341
O00635 / TRIM38 / tripartite motif containing 38ENSG0000011234339
TRIM4 / Q9C037 / tripartite motif containing 4ENSG0000014683339
TRIM39-RPP21 / TRIM39-RPP21 readthroughENSG0000024816736
TRIM6-TRIM34 / TRIM6-TRIM34 readthroughENSG0000025858835
TRIM6 / Q9C030 / tripartite motif containing 6ENSG0000012123635
Q495X7 / TRIM60 / tripartite motif containing 60ENSG0000017697934
A6NK02 / TRIM75P / tripartite motif containing 75, pseudogeneENSG0000025037434
TRIM5 / Q9C035 / tripartite motif containing 5ENSG0000013225633
Q9BYJ4 / TRIM34 / tripartite motif containing 34ENSG0000025865933
Q8IYM9 / TRIM22 / tripartite motif containing 22ENSG0000013227431


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR017907  Zinc finger, RING-type, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0032897 negative regulation of viral transcription IDA
 biological_processGO:0045087 innate immune response IMP
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:0046597 negative regulation of viral entry into host cell IMP
 biological_processGO:0046598 positive regulation of viral entry into host cell IMP
 biological_processGO:0050768 negative regulation of neurogenesis IEA
 biological_processGO:0051607 defense response to virus IEA
 biological_processGO:1902187 negative regulation of viral release from host cell IMP
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008134 transcription factor binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0019904 protein domain specific binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IEA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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