ENSG00000258588


Homo sapiens

Features
Gene ID: ENSG00000258588
  
Biological name :TRIM6-TRIM34
  
Synonyms : TRIM6-TRIM34 / TRIM6-TRIM34 readthrough
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: 1
Band: p15.4
Gene start: 5596725
Gene end: 5644398
  
Corresponding Affymetrix probe sets: 221044_s_at (Human Genome U133 Plus 2.0 Array)   224175_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000346916
NCBI entrez gene - 445372     See in Manteia.
RefSeq - NM_001003819
RefSeq Peptide - NP_001003819
swissprot - B2RNG4
Ensembl - ENSG00000258588
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Trim34aENSMUSG00000056144Mus musculus
 Trim34bENSMUSG00000090215Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9BYJ4 / TRIM34 / tripartite motif containing 34ENSG0000025865957
Q8IYM9 / TRIM22 / tripartite motif containing 22ENSG0000013227436
TRIM6 / Q9C030 / tripartite motif containing 6ENSG0000012123636
TRIM5 / Q9C035 / tripartite motif containing 5ENSG0000013225633
P19474 / TRIM21 / tripartite motif containing 21ENSG0000013210925
Q6AZZ1 / TRIM68 / tripartite motif containing 68ENSG0000016733321
Q8NG06 / TRIM58 / tripartite motif containing 58ENSG0000016272220
Q96F44 / TRIM11 / tripartite motif containing 11ENSG0000015437020
Q9HCM9 / TRIM39 / tripartite motif containing 39ENSG0000020459919
O00635 / TRIM38 / tripartite motif containing 38ENSG0000011234319
TRIM4 / Q9C037 / tripartite motif containing 4ENSG0000014683318
Q495X7 / TRIM60 / tripartite motif containing 60ENSG0000017697918
A6NK02 / TRIM75P / tripartite motif containing 75, pseudogeneENSG0000025037417
Q9Y577 / TRIM17 / tripartite motif containing 17ENSG0000016293117
TRIM39-RPP21 / TRIM39-RPP21 readthroughENSG0000024816715


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR017907  Zinc finger, RING-type, conserved site
 IPR027370  RING-type zinc-finger, LisH dimerisation motif
 IPR035826  TRIM34, PRY/SPRY domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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