ENSMUSG00000090215


Mus musculus

Features
Gene ID: ENSMUSG00000090215
  
Biological name :Trim34b
  
Synonyms : Trim34b
  
Possible biological names infered from orthology : Q9BYJ4 / TRIM34 / TRIM6-TRIM34 / TRIM6-TRIM34 readthrough / tripartite motif containing 34
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: E3
Gene start: 104329471
Gene end: 104336909
  
Corresponding Affymetrix probe sets: 1421550_a_at (Mouse Genome 430 2.0 Array)   1426092_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000102460
Ensembl peptide - ENSMUSP00000136926
NCBI entrez gene - 434218     See in Manteia.
MGI - MGI:4821264
RefSeq - NM_001243916
RefSeq Peptide - NP_001230845
swissprot - K7N6K2
swissprot - J3QNR8
Ensembl - ENSMUSG00000090215
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q9BYJ4ENSG00000258659Homo sapiens
 TRIM6-TRIM34ENSG00000258588Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Trim34a / tripartite motif-containing 34A / TRIM34* / Q9BYJ4* / TRIM6-TRIM34* / TRIM6-TRIM34 readthrough* / tripartite motif containing 34*ENSMUSG0000005614498
Trim6 / Q8BGE7 / Tripartite motif-containing protein 6 / Q9C030* / tripartite motif containing 6*ENSMUSG0000007224452
Trim5 / Q9C035* / tripartite motif containing 5*ENSMUSG0000006044142
Trim12c / tripartite motif-containing 12C / TRIM5* / Q9C035* / tripartite motif containing 5*ENSMUSG0000005714341
P15533 / Trim30a / Mus musculus tripartite motif-containing 30A (Trim30a), transcript variant 2, mRNA. / TRIM5* / Q9C035* / tripartite motif containing 5*ENSMUSG0000003092140
Trim30d / tripartite motif-containing 30D / TRIM5* / Q9C035* / tripartite motif containing 5*ENSMUSG0000005759639
Trim30c / TRIM5* / Q9C035* / tripartite motif containing 5*ENSMUSG0000007861639
Trim21 / tripartite motif-containing 21 / P19474*ENSMUSG0000003096636
Q5NCC9 / Trim58 / tripartite motif-containing 58 / Q8NG06*ENSMUSG0000003712433
Q99PQ2 / Trim11 / E3 ubiquitin-protein ligase TRIM11 / Q96F44* / tripartite motif containing 11*ENSMUSG0000002045532
Trim68 / tripartite motif-containing 68 / Q6AZZ1*ENSMUSG0000007396830
Trim39 / tripartite motif-containing 39 / Q9HCM9* / TRIM39-RPP21* / TRIM39-RPP21 readthrough*ENSMUSG0000004540930
Q7TPM3 / Trim17 / E3 ubiquitin-protein ligase TRIM17 / Q9Y577* / tripartite motif containing 17*ENSMUSG0000003696429
Trim38 / tripartite motif-containing 38 / O00635*ENSMUSG0000006414027
Q8VI40 / Trim60 / tripartite motif-containing 60 / Q495X7*ENSMUSG0000005349026
Q99PQ1 / Trim12a / Tripartite motif-containing protein 12A / TRIM5* / Q9C035* / tripartite motif containing 5*ENSMUSG0000006625826
Q3UWZ0 / Trim75 / tripartite motif-containing 75 / A6NK02* / TRIM75P* / tripartite motif containing 75, pseudogene*ENSMUSG0000007108925
Trim61 / tripartite motif-containing 61ENSMUSG0000010971822


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR017907  Zinc finger, RING-type, conserved site
 IPR027370  RING-type zinc-finger, LisH dimerisation motif
 IPR035826  TRIM34, PRY/SPRY domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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