ENSMUSG00000036964


Mus musculus

Features
Gene ID: ENSMUSG00000036964
  
Biological name :Trim17
  
Synonyms : E3 ubiquitin-protein ligase TRIM17 / Q7TPM3 / Trim17
  
Possible biological names infered from orthology : Q9Y577 / tripartite motif containing 17
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: B1.3
Gene start: 58954685
Gene end: 58973098
  
Corresponding Affymetrix probe sets: 10376446 (MoGene1.0st)   10376455 (MoGene1.0st)   1427507_at (Mouse Genome 430 2.0 Array)   1435865_at (Mouse Genome 430 2.0 Array)   1440932_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000037248
Ensembl peptide - ENSMUSP00000074639
NCBI entrez gene - 56631     See in Manteia.
MGI - MGI:1861440
RefSeq - XM_011249157
RefSeq - NM_031172
RefSeq - XM_006533811
RefSeq - XM_006533812
RefSeq Peptide - NP_112449
swissprot - A2AB81
swissprot - Q7TPM3
Ensembl - ENSMUSG00000036964
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q9Y577ENSG00000162931Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q99PQ2 / Trim11 / E3 ubiquitin-protein ligase TRIM11 / Q96F44* / tripartite motif containing 11*ENSMUSG0000002045544
Q5NCC9 / Trim58 / tripartite motif-containing 58 / Q8NG06*ENSMUSG0000003712437
Trim39 / tripartite motif-containing 39 / Q9HCM9* / TRIM39-RPP21* / TRIM39-RPP21 readthrough*ENSMUSG0000004540936
Trim68 / tripartite motif-containing 68 / Q6AZZ1*ENSMUSG0000007396835
Trim6 / Q8BGE7 / Tripartite motif-containing protein 6 / Q9C030* / tripartite motif containing 6*ENSMUSG0000007224432
Trim21 / tripartite motif-containing 21 / P19474*ENSMUSG0000003096631
Trim38 / tripartite motif-containing 38 / O00635*ENSMUSG0000006414030
Trim34a / tripartite motif-containing 34A / TRIM34* / Q9BYJ4* / TRIM6-TRIM34* / TRIM6-TRIM34 readthrough* / tripartite motif containing 34*ENSMUSG0000005614429
Q3UWZ0 / Trim75 / tripartite motif-containing 75 / A6NK02* / TRIM75P* / tripartite motif containing 75, pseudogene*ENSMUSG0000007108929
Trim34b / TRIM34* / Q9BYJ4* / TRIM6-TRIM34* / TRIM6-TRIM34 readthrough* / tripartite motif containing 34*ENSMUSG0000009021529
P15533 / Trim30a / Mus musculus tripartite motif-containing 30A (Trim30a), transcript variant 2, mRNA. / TRIM5* / Q9C035* / tripartite motif containing 5*ENSMUSG0000003092127
Trim61 / tripartite motif-containing 61ENSMUSG0000010971827
Trim12c / tripartite motif-containing 12C / TRIM5* / Q9C035* / tripartite motif containing 5*ENSMUSG0000005714327
Trim30d / tripartite motif-containing 30D / TRIM5* / Q9C035* / tripartite motif containing 5*ENSMUSG0000005759627
Trim5 / Q9C035* / tripartite motif containing 5*ENSMUSG0000006044127
Q8VI40 / Trim60 / tripartite motif-containing 60 / Q495X7*ENSMUSG0000005349026
Trim30c / TRIM5* / Q9C035* / tripartite motif containing 5*ENSMUSG0000007861626
Q99PQ1 / Trim12a / Tripartite motif-containing protein 12A / TRIM5* / Q9C035* / tripartite motif containing 5*ENSMUSG0000006625818


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR017907  Zinc finger, RING-type, conserved site
 IPR027370  RING-type zinc-finger, LisH dimerisation motif
 IPR032918  E3 ubiquitin-protein ligase TRIM17
 IPR035687  TRIM17, PRY/SPRY domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006914 autophagy ISO
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0032880 regulation of protein localization IEA
 biological_processGO:0051865 protein autoubiquitination IEA
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity ISS
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0030674 protein binding, bridging IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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