ENSMUSG00000066258


Mus musculus

Features
Gene ID: ENSMUSG00000066258
  
Biological name :Trim12a
  
Synonyms : Q99PQ1 / Trim12a / Tripartite motif-containing protein 12A
  
Possible biological names infered from orthology : Q9C035 / TRIM5 / tripartite motif containing 5
  
Species: Mus musculus
  
Chr. number: 7
Strand: -1
Band: E3
Gene start: 104299894
Gene end: 104315466
  
Corresponding Affymetrix probe sets: 10566326 (MoGene1.0st)   1420648_at (Mouse Genome 430 2.0 Array)   1437432_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000102452
Ensembl peptide - ENSMUSP00000065008
Ensembl peptide - ENSMUSP00000102450
NCBI entrez gene - 76681     See in Manteia.
MGI - MGI:1923931
RefSeq - XM_017312375
RefSeq - NM_023835
RefSeq - XM_017312372
RefSeq - XM_017312373
RefSeq - XM_017312374
RefSeq Peptide - NP_076324
swissprot - D3YVI1
swissprot - A0A0R4J1B5
swissprot - Q99PQ1
Ensembl - ENSMUSG00000066258
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRIM5ENSG00000132256Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Trim5 / Q9C035* / tripartite motif containing 5*ENSMUSG0000006044193
Trim12c / tripartite motif-containing 12C / TRIM5* / Q9C035* / tripartite motif containing 5*ENSMUSG0000005714392
P15533 / Trim30a / Mus musculus tripartite motif-containing 30A (Trim30a), transcript variant 2, mRNA. / TRIM5* / Q9C035* / tripartite motif containing 5*ENSMUSG0000003092157
Trim30c / TRIM5* / Q9C035* / tripartite motif containing 5*ENSMUSG0000007861653
Trim30d / tripartite motif-containing 30D / TRIM5* / Q9C035* / tripartite motif containing 5*ENSMUSG0000005759653
Trim6 / Q8BGE7 / Tripartite motif-containing protein 6 / Q9C030* / tripartite motif containing 6*ENSMUSG0000007224444
Trim34a / tripartite motif-containing 34A / TRIM34* / Q9BYJ4* / TRIM6-TRIM34* / TRIM6-TRIM34 readthrough* / tripartite motif containing 34*ENSMUSG0000005614443
Trim34b / TRIM34* / Q9BYJ4* / TRIM6-TRIM34* / TRIM6-TRIM34 readthrough* / tripartite motif containing 34*ENSMUSG0000009021543
Trim21 / tripartite motif-containing 21 / P19474*ENSMUSG0000003096633
Q99PQ2 / Trim11 / E3 ubiquitin-protein ligase TRIM11 / Q96F44* / tripartite motif containing 11*ENSMUSG0000002045530
Q7TPM3 / Trim17 / E3 ubiquitin-protein ligase TRIM17 / Q9Y577* / tripartite motif containing 17*ENSMUSG0000003696429
Q5NCC9 / Trim58 / tripartite motif-containing 58 / Q8NG06*ENSMUSG0000003712428
Trim39 / tripartite motif-containing 39 / Q9HCM9* / TRIM39-RPP21* / TRIM39-RPP21 readthrough*ENSMUSG0000004540928
Trim68 / tripartite motif-containing 68 / Q6AZZ1*ENSMUSG0000007396828
Trim38 / tripartite motif-containing 38 / O00635*ENSMUSG0000006414027
Q3UWZ0 / Trim75 / tripartite motif-containing 75 / A6NK02* / TRIM75P* / tripartite motif containing 75, pseudogene*ENSMUSG0000007108924
Q8VI40 / Trim60 / tripartite motif-containing 60 / Q495X7*ENSMUSG0000005349021
Trim61 / tripartite motif-containing 61ENSMUSG0000010971818


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR032917  Tripartite motif-containing protein 5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0008150 biological_process ND
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0045087 innate immune response IEA
 biological_processGO:0051607 defense response to virus IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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