ENSMUSG00000038860


Mus musculus

Features
Gene ID: ENSMUSG00000038860
  
Biological name :Garnl3
  
Synonyms : Garnl3 / Mus musculus GTPase activating RANGAP domain-like 3 (Garnl3), transcript variant 2, mRNA. / Q3V0G7
  
Possible biological names infered from orthology : GTPase activating Rap/RanGAP domain like 3 / Q5VVW2
  
Species: Mus musculus
  
Chr. number: 2
Strand: -1
Band: B
Gene start: 32986224
Gene end: 33131654
  
Corresponding Affymetrix probe sets: 10481772 (MoGene1.0st)   1433553_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000119973
Ensembl peptide - ENSMUSP00000099874
Ensembl peptide - ENSMUSP00000122576
Ensembl peptide - ENSMUSP00000142077
Ensembl peptide - ENSMUSP00000141523
Ensembl peptide - ENSMUSP00000123601
Ensembl peptide - ENSMUSP00000057582
NCBI entrez gene - 99326     See in Manteia.
MGI - MGI:2139309
RefSeq - XM_017319358
RefSeq - XM_006498482
RefSeq - XM_006498483
RefSeq - XM_006498484
RefSeq - XM_006498485
RefSeq - XM_006498486
RefSeq - XM_006498487
RefSeq - XM_006498488
RefSeq - XM_011239223
RefSeq - XM_011239224
RefSeq - XM_011239225
RefSeq - NM_001355200
RefSeq - NM_001355201
RefSeq - NM_001355202
RefSeq - NM_178888
RefSeq - XM_006498481
RefSeq Peptide - NP_001342130
RefSeq Peptide - NP_001342131
RefSeq Peptide - NP_849219
RefSeq Peptide - NP_001342129
swissprot - A0A0A6YWF1
swissprot - B1AW31
swissprot - Q3V0G7
swissprot - A2AUQ6
swissprot - A2AHW8
swissprot - A0A0A6YXP5
Ensembl - ENSMUSG00000038860
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 A5PF44ENSDARG00000060631Danio rerio
 GARNL3ENSGALG00000000847Gallus gallus
 GARNL3ENSG00000136895Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
G3X9J0 / Sipa1l3 / signal-induced proliferation-associated 1 like 3 / O60292*ENSMUSG0000003058325
Q80TE4 / Sipa1l2 / Mus musculus signal-induced proliferation-associated 1 like 2 (Sipa1l2), transcript variant 2, mRNA. / Q9P2F8* / signal induced proliferation associated 1 like 2*ENSMUSG0000000199524
Q8C0T5 / Sipa1l1 / Signal-induced proliferation-associated 1-like protein 1 / O43166* / signal induced proliferation associated 1 like 1*ENSMUSG0000004270024
Sipa1 / signal-induced proliferation-associated 1 / Q96FS4*ENSMUSG0000005691721
Q5SVL6 / Rap1gap2 / Rap1 GTPase-activating protein 2 / Q684P5*ENSMUSG0000003880718
A2ALS5 / Rap1gap / Mus musculus Rap1 GTPase-activating protein (Rap1gap), transcript variant 5, mRNA. / P47736* / RAP1 GTPase activating protein*ENSMUSG0000004135117
Q6GYP7 / Ralgapa1 / Ral GTPase activating protein, alpha subunit 1 / Q6GYQ0* / Ral GTPase activating protein catalytic alpha subunit 1*ENSMUSG0000002102712
A3KGS3 / Ralgapa2 / Ral GTPase-activating protein subunit alpha-2 / Q2PPJ7* / Ral GTPase activating protein catalytic alpha subunit 2*ENSMUSG0000003711012
Tsc2 / tuberous sclerosis 2 / P49815* / TSC complex subunit 2*ENSMUSG0000000249611


Protein motifs (from Interpro)
Interpro ID Name
 IPR000331  Rap GTPase activating protein domain
 IPR001180  Citron homology (CNH) domain
 IPR035974  Rap/Ran-GAP superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0051056 regulation of small GTPase mediated signal transduction IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle ISO
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005096 GTPase activator activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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