ENSG00000136895


Homo sapiens

Features
Gene ID: ENSG00000136895
  
Biological name :GARNL3
  
Synonyms : GARNL3 / GTPase activating Rap/RanGAP domain like 3 / Q5VVW2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: 1
Band: q33.3
Gene start: 127224265
Gene end: 127393660
  
Corresponding Affymetrix probe sets: 1563907_at (Human Genome U133 Plus 2.0 Array)   223604_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000400579
Ensembl peptide - ENSP00000411160
Ensembl peptide - ENSP00000474589
Ensembl peptide - ENSP00000416473
Ensembl peptide - ENSP00000411329
Ensembl peptide - ENSP00000362484
Ensembl peptide - ENSP00000362485
Ensembl peptide - ENSP00000389679
Ensembl peptide - ENSP00000396205
Ensembl peptide - ENSP00000396319
Ensembl peptide - ENSP00000397246
NCBI entrez gene - 84253     See in Manteia.
RefSeq - XM_017015202
RefSeq - NM_001286779
RefSeq - NM_032293
RefSeq - XM_005252267
RefSeq - XM_005252268
RefSeq - XM_011519086
RefSeq - XM_011519087
RefSeq - XM_011519089
RefSeq - XM_011519090
RefSeq Peptide - NP_115669
RefSeq Peptide - NP_001273708
swissprot - Q5VVW2
swissprot - C9JFS0
swissprot - C9J9U0
swissprot - C9J8L5
swissprot - F2Z2Q8
swissprot - F8WB68
swissprot - S4R3P7
swissprot - A0A0C4DFW0
swissprot - Q5JS19
Ensembl - ENSG00000136895
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 A5PF44ENSDARG00000060631Danio rerio
 GARNL3ENSGALG00000000847Gallus gallus
 Garnl3ENSMUSG00000038860Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9P2F8 / SIPA1L2 / signal induced proliferation associated 1 like 2ENSG0000011699125
O60292 / SIPA1L3 / signal induced proliferation associated 1 like 3ENSG0000010573825
O43166 / SIPA1L1 / signal induced proliferation associated 1 like 1ENSG0000019755524
SIPA1 / Q96FS4 / signal-induced proliferation-associated 1ENSG0000021344522
P47736 / RAP1GAP / RAP1 GTPase activating proteinENSG0000007686418
Q684P5 / RAP1GAP2 / RAP1 GTPase activating protein 2ENSG0000013235918
Q6GYQ0 / RALGAPA1 / Ral GTPase activating protein catalytic alpha subunit 1ENSG0000017437312
Q2PPJ7 / RALGAPA2 / Ral GTPase activating protein catalytic alpha subunit 2ENSG0000018855912
TSC2 / P49815 / TSC complex subunit 2ENSG0000010319711


Protein motifs (from Interpro)
Interpro ID Name
 IPR000331  Rap GTPase activating protein domain
 IPR001180  Citron homology (CNH) domain
 IPR035974  Rap/Ran-GAP superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0051056 regulation of small GTPase mediated signal transduction IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 molecular_functionGO:0005096 GTPase activator activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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