ENSDARG00000055854


Danio rerio

Features
Gene ID: ENSDARG00000055854
  
Biological name :nr4a3
  
Synonyms : nr4a3 / nuclear receptor subfamily 4, group A, member 3
  
Possible biological names infered from orthology : Q92570 / Q9QZB6
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 27345383
Gene end: 27369782
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000072712
Ensembl peptide - ENSDARP00000137021
Ensembl peptide - ENSDARP00000113856
NCBI entrez gene - 548604     See in Manteia.
swissprot - E9QI47
swissprot - A0A0R4IMQ4
swissprot - F1R8N1
ZFIN ID - ZDB-GENE-070824-4
Ensembl - ENSDARG00000055854
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NR4A3ENSGALG00000013568Gallus gallus
 NR4A3ENSG00000119508Homo sapiens
 Nr4a3ENSMUSG00000028341Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nr4a2a / nuclear receptor subfamily 4, group A, member 2a / NR4A2* / Q06219* / P43354* / nuclear receptor subfamily 4 group A member 2*ENSDARG0000001700751
nr4a2b / nuclear receptor subfamily 4, group A, member 2bENSDARG0000004453249
nr4a1 / nuclear receptor subfamily 4, group A, member 1 / P12813* / P22736*ENSDARG0000000079641
esrrb / esrrga / estrogen-related receptor betaENSDARG0000000486119
esrra / estrogen-related receptor alpha / O08580* / P11474* / Steroid hormone receptor ERR1 *ENSDARG0000006926619
esrrb / estrogen-related receptor beta / O95718*ENSDARG0000010084719
esr1 / estrogen receptor 1 / P03372* / P19785* / Estrogen receptor *ENSDARG0000000411118
esrrgb / estrogen-related receptor gamma bENSDARG0000001169618
nr3c1 / nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) / P04150* / nuclear receptor subfamily 3 group C member 1*ENSDARG0000002503218
esr2b / estrogen receptor 2b / ESR2* / O08537* / Q92731* / estrogen receptor 2* / Estrogen receptor beta *ENSDARG0000003418118
ar / androgen receptor / P10275* / P19091*ENSDARG0000006797618
esr2a / estrogen receptor 2a / ESR2* / O08537* / Q92731* / estrogen receptor 2* / Estrogen receptor beta *ENSDARG0000001645417
nr3c2 / nuclear receptor subfamily 3, group C, member 2 / P08235*ENSDARG0000010208216
pgr / progesterone receptor / P06401* / Q00175*ENSDARG0000003596615
esrrd / estrogen-related receptor deltaENSDARG0000001506411
FO681288.3 / ESRRG* / P62508* / P62509* / estrogen related receptor gamma* / Mus musculus estrogen-related receptor gamma (Esrrg), transcript variant 5, mRNA.*ENSDARG0000011104310


Protein motifs (from Interpro)
Interpro ID Name
 IPR000536  Nuclear hormone receptor, ligand-binding domain
 IPR001628  Zinc finger, nuclear hormone receptor-type
 IPR001723  Nuclear hormone receptor
 IPR003070  Orphan nuclear receptor
 IPR003073  Orphan nuclear receptor, NURR type
 IPR013088  Zinc finger, NHR/GATA-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0030522 intracellular receptor signaling pathway IEA
 biological_processGO:0043401 steroid hormone mediated signaling pathway IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0003707 steroid hormone receptor activity IEA
 molecular_functionGO:0004879 nuclear receptor activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Nuclear Receptor transcription pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0009327 neutrophil neutrophil decreased amount , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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