ENSDARG00000005050


Danio rerio

Features
Gene ID: ENSDARG00000005050
  
Biological name :wnt2ba
  
Synonyms : wingless-type MMTV integration site family, member 2Ba / wnt2ba
  
Possible biological names infered from orthology : O70283 / Q93097 / wingless-type MMTV integration site family, member 2B / WNT2B / Wnt family member 2B
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 48253449
Gene end: 48271687
  
Corresponding Affymetrix probe sets: Dr.19933.1.S1_at (Zebrafish Array)   NM_182876_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000094209
NCBI entrez gene - 359837     See in Manteia.
RefSeq - NM_182876
RefSeq Peptide - NP_878296
swissprot - B3DFK5
ZFIN ID - ZDB-GENE-030717-2
Ensembl - ENSDARG00000005050
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 WNT2BENSGALG00000034196Gallus gallus
 WNT2BENSG00000134245Homo sapiens
 Wnt2bENSMUSG00000027840Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
wnt2bb / wingless-type MMTV integration site family, member 2Bb / WNT2B* / Q93097* / O70283* / Wnt family member 2B* / wingless-type MMTV integration site family, member 2B*ENSDARG0000003223475
wnt2 / Q92048 / wingless-type MMTV integration site family member 2 / P21552* / P09544* / Wnt family member 2*ENSDARG0000004111760
wnt5b / Q92050 / wingless-type MMTV integration site family, member 5b / Q9H1J7* / P22726* / Wnt family member 5B*ENSDARG0000010246445
wnt5a / wingless-type MMTV integration site family, member 5a / P41221* / Wnt family member 5A*ENSDARG0000010497343
wnt7bb / wingless-type MMTV integration site family, member 7Bb / WNT7B* / P56706* / P28047* / Wnt family member 7B* / wingless-type MMTV integration site family, member 7B*ENSDARG0000007110742
wnt7aa / wingless-type MMTV integration site family, member 7Aa / WNT7A* / P24383* / O00755* / Wnt family member 7A* / wingless-type MMTV integration site family, member 7A*ENSDARG0000004482741
wnt7ab / wingless-type MMTV integration site family, member 7Ab / WNT7A* / O00755* / Wnt family member 7A*ENSDARG0000000248341
wnt4a / P47793 / wingless-type MMTV integration site family, member 4a / WNT4* / P56705* / P22724* / Wnt family member 4* / wingless-type MMTV integration site family, member 4*ENSDARG0000007120841
wnt7ba / wingless-type MMTV integration site family, member 7Ba / WNT7B* / P56706* / P28047* / Wnt family member 7B* / wingless-type MMTV integration site family, member 7B*ENSDARG0000002285841
wnt4b / wingless-type MMTV integration site family, member 4bENSDARG0000004015940
wnt3a / wingless-type MMTV integration site family, member 3A / P56704* / Wnt family member 3A*ENSDARG0000005882239
wnt3 / wingless-type MMTV integration site family, member 3 / P17553* / P56703* / Wnt family member 3*ENSDARG0000003899038
wnt16 / wingless-type MMTV integration site family, member 16 / Q9QYS1* / Q9UBV4* / Wnt family member 16*ENSDARG0000009497337
wnt1 / P24257 / wingless-type MMTV integration site family, member 1 / P04628* / P04426* / Wnt family member 1*ENSDARG0000005555437
wnt6b / wingless-type MMTV integration site family, member 6b / WNT6* / Q9Y6F9* / P22727* / Wnt family member 6* / wingless-type MMTV integration site family, member 6*ENSDARG0000007393536
wnt11r / wingless-type MMTV integration site family, member 11, related / WNT11* / P48615* / O96014* / Wnt family member 11* / wingless-type MMTV integration site family, member 11*ENSDARG0000001479635
wnt11 / wingless-type MMTV integration site family, member 11ENSDARG0000000425633
wnt6a / wingless-type MMTV integration site family, member 6aENSDARG0000003828333


Protein motifs (from Interpro)
Interpro ID Name
 IPR005817  Wnt
 IPR009140  Wnt-2 protein
 IPR018161  Wnt protein, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0016055 Wnt signaling pathway IBA
 biological_processGO:0030182 neuron differentiation IBA
 biological_processGO:0035118 embryonic pectoral fin morphogenesis IMP
 biological_processGO:0045165 cell fate commitment IBA
 biological_processGO:0070654 sensory epithelium regeneration IEP
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005102 signaling receptor binding IEA
 molecular_functionGO:0005109 frizzled binding IBA


Pathways (from Reactome)
Pathway description
WNT ligand biogenesis and trafficking


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000141 pectoral fin bud pectoral fin bud aplastic , abnormal
pectoral fin bud decreased size , abnormal
pectoral fin bud absent , abnormal
Show

 ZFA:0001161 pectoral fin pectoral fin aplastic , abnormal
Show

 ZFA:0001453 pectoral fin field pectoral fin field morphology , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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