ENSDARG00000032234


Danio rerio

Features
Gene ID: ENSDARG00000032234
  
Biological name :wnt2bb
  
Synonyms : wingless-type MMTV integration site family, member 2Bb / wnt2bb
  
Possible biological names infered from orthology : O70283 / Q93097 / wingless-type MMTV integration site family, member 2B / WNT2B / Wnt family member 2B
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 27743550
Gene end: 27768785
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000046003
NCBI entrez gene - 556087     See in Manteia.
RefSeq - NM_001044344
RefSeq Peptide - NP_001037809
swissprot - B0S7E3
ZFIN ID - ZDB-GENE-060824-6
Ensembl - ENSDARG00000032234
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 WNT2BENSGALG00000034196Gallus gallus
 WNT2BENSG00000134245Homo sapiens
 Wnt2bENSMUSG00000027840Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
wnt2ba / wingless-type MMTV integration site family, member 2Ba / WNT2B* / Q93097* / Wnt family member 2B*ENSDARG0000000505073
wnt2 / Q92048 / wingless-type MMTV integration site family member 2 / P21552* / P09544* / Wnt family member 2*ENSDARG0000004111758
wnt5b / Q92050 / wingless-type MMTV integration site family, member 5b / Q9H1J7* / P22726* / Wnt family member 5B*ENSDARG0000010246444
wnt7bb / wingless-type MMTV integration site family, member 7Bb / WNT7B* / P56706* / P28047* / Wnt family member 7B* / wingless-type MMTV integration site family, member 7B*ENSDARG0000007110742
wnt7ba / wingless-type MMTV integration site family, member 7Ba / WNT7B* / P56706* / P28047* / Wnt family member 7B* / wingless-type MMTV integration site family, member 7B*ENSDARG0000002285841
wnt5a / wingless-type MMTV integration site family, member 5a / P41221* / Wnt family member 5A*ENSDARG0000010497341
wnt7ab / wingless-type MMTV integration site family, member 7Ab / WNT7A* / O00755* / Wnt family member 7A*ENSDARG0000000248341
wnt7aa / wingless-type MMTV integration site family, member 7Aa / WNT7A* / P24383* / O00755* / Wnt family member 7A* / wingless-type MMTV integration site family, member 7A*ENSDARG0000004482741
wnt4a / P47793 / wingless-type MMTV integration site family, member 4a / WNT4* / P56705* / P22724* / Wnt family member 4* / wingless-type MMTV integration site family, member 4*ENSDARG0000007120840
wnt4b / wingless-type MMTV integration site family, member 4bENSDARG0000004015938
wnt3a / wingless-type MMTV integration site family, member 3A / P56704* / Wnt family member 3A*ENSDARG0000005882237
wnt3 / wingless-type MMTV integration site family, member 3 / P17553* / P56703* / Wnt family member 3*ENSDARG0000003899037
wnt6b / wingless-type MMTV integration site family, member 6b / WNT6* / Q9Y6F9* / P22727* / Wnt family member 6* / wingless-type MMTV integration site family, member 6*ENSDARG0000007393536
wnt1 / P24257 / wingless-type MMTV integration site family, member 1 / P04628* / P04426* / Wnt family member 1*ENSDARG0000005555435
wnt16 / wingless-type MMTV integration site family, member 16 / Q9QYS1* / Q9UBV4* / Wnt family member 16*ENSDARG0000009497335
wnt11r / wingless-type MMTV integration site family, member 11, related / WNT11* / P48615* / O96014* / Wnt family member 11* / wingless-type MMTV integration site family, member 11*ENSDARG0000001479634
wnt11 / wingless-type MMTV integration site family, member 11ENSDARG0000000425632
wnt6a / wingless-type MMTV integration site family, member 6aENSDARG0000003828331


Protein motifs (from Interpro)
Interpro ID Name
 IPR005817  Wnt
 IPR009140  Wnt-2 protein
 IPR018161  Wnt protein, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001525 angiogenesis IGI
 biological_processGO:0001889 liver development IMP
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0016055 Wnt signaling pathway IEA
 biological_processGO:0030182 neuron differentiation IBA
 biological_processGO:0031016 pancreas development IGI
 biological_processGO:0045165 cell fate commitment IBA
 biological_processGO:0048794 swim bladder development IMP
 biological_processGO:0061008 hepaticobiliary system development IGI
 biological_processGO:0061009 common bile duct development IMP
 biological_processGO:0061010 gall bladder development IMP
 biological_processGO:0061011 hepatic duct development IGI
 biological_processGO:0072574 hepatocyte proliferation IMP
 biological_processGO:2000056 regulation of Wnt signaling pathway involved in digestive tract morphogenesis IGI
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IBA
 molecular_functionGO:0005102 signaling receptor binding IEA
 molecular_functionGO:0005109 frizzled binding IBA


Pathways (from Reactome)
Pathway description
WNT ligand biogenesis and trafficking


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000076 swim bladder swim bladder decreased size , abnormal
Show

 ZFA:0000123 liver liver decreased size , abnormal
liver quality , abnormal
liver aplastic , abnormal
liver hypoplastic , abnormal
liver absent , abnormal
liver morphology , abnormal
liver increased variability of size , abnormal
Show

 ZFA:0000140 pancreas pancreas decreased size , abnormal
Show

 ZFA:0000208 gall bladder gall bladder morphology , abnormal
gall bladder absent , abnormal
gall bladder decreased size , abnormal
gall bladder position , abnormal
Show

 ZFA:0001094 whole organism whole organism dead , abnormal
Show

 ZFA:0001114 head head morphology , abnormal
Show

 ZFA:0001115 trunk trunk morphology , abnormal
Show

 ZFA:0001285 intersegmental vessel intersegmental vessel decreased length , abnormal
intersegmental vessel absent , abnormal
Show

 ZFA:0005170 extrahepatic duct extrahepatic duct morphology , abnormal
extrahepatic duct decreased size , abnormal
extrahepatic duct absent , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr