Manteia

ENSDARG00000094973

Danio rerio

Features

Gene ID:	ENSDARG00000094973

Biological name :	wnt16

Synonyms :	wingless-type MMTV integration site family, member 16 / wnt16

Possible biological names infered from orthology :	Q9QYS1 / Q9UBV4 / Wnt family member 16

Species:	Danio rerio

Chr. number:	4
Strand:	1
Band:
Gene start:	10706755
Gene end:	10713584

Corresponding Affymetrix probe sets:

Cross references:	Ensembl peptide - ENSDARP00000093319 Ensembl peptide - ENSDARP00000122572 NCBI entrez gene - 791563 See in Manteia. RefSeq - NM_001100046 RefSeq Peptide - NP_001093516 swissprot - F2Z4V5 swissprot - A5WVL3 ZFIN ID - ZDB-GENE-040426-2330 Ensembl - ENSDARG00000094973

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
WNT16	ENSGALG00000028069	Gallus gallus
WNT16	ENSG00000002745	Homo sapiens
Wnt16	ENSMUSG00000029671	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
wnt7ba / wingless-type MMTV integration site family, member 7Ba / WNT7B* / P56706* / P28047* / Wnt family member 7B* / wingless-type MMTV integration site family, member 7B*	ENSDARG00000022858	41
wnt3 / wingless-type MMTV integration site family, member 3 / P17553* / P56703* / Wnt family member 3*	ENSDARG00000038990	40
wnt3a / wingless-type MMTV integration site family, member 3A / P56704* / Wnt family member 3A*	ENSDARG00000058822	40
wnt2ba / wingless-type MMTV integration site family, member 2Ba / WNT2B* / Q93097* / Wnt family member 2B*	ENSDARG00000005050	40
wnt7bb / wingless-type MMTV integration site family, member 7Bb / WNT7B* / P56706* / P28047* / Wnt family member 7B* / wingless-type MMTV integration site family, member 7B*	ENSDARG00000071107	40
wnt2bb / wingless-type MMTV integration site family, member 2Bb / WNT2B* / Q93097* / O70283* / Wnt family member 2B* / wingless-type MMTV integration site family, member 2B*	ENSDARG00000032234	39
wnt4a / P47793 / wingless-type MMTV integration site family, member 4a / WNT4* / P56705* / P22724* / Wnt family member 4* / wingless-type MMTV integration site family, member 4*	ENSDARG00000071208	39
wnt7ab / wingless-type MMTV integration site family, member 7Ab / WNT7A* / O00755* / Wnt family member 7A*	ENSDARG00000002483	38
wnt7aa / wingless-type MMTV integration site family, member 7Aa / WNT7A* / P24383* / O00755* / Wnt family member 7A* / wingless-type MMTV integration site family, member 7A*	ENSDARG00000044827	38
wnt1 / P24257 / wingless-type MMTV integration site family, member 1 / P04628* / P04426* / Wnt family member 1*	ENSDARG00000055554	38
wnt5b / Q92050 / wingless-type MMTV integration site family, member 5b / Q9H1J7* / P22726* / Wnt family member 5B*	ENSDARG00000102464	37
wnt5a / wingless-type MMTV integration site family, member 5a / P41221* / Wnt family member 5A*	ENSDARG00000104973	37
wnt11r / wingless-type MMTV integration site family, member 11, related / WNT11* / P48615* / O96014* / Wnt family member 11* / wingless-type MMTV integration site family, member 11*	ENSDARG00000014796	37
wnt4b / wingless-type MMTV integration site family, member 4b	ENSDARG00000040159	37
wnt2 / Q92048 / wingless-type MMTV integration site family member 2 / P21552* / P09544* / Wnt family member 2*	ENSDARG00000041117	37
wnt11 / wingless-type MMTV integration site family, member 11	ENSDARG00000004256	35
wnt6b / wingless-type MMTV integration site family, member 6b / WNT6* / Q9Y6F9* / P22727* / Wnt family member 6* / wingless-type MMTV integration site family, member 6*	ENSDARG00000073935	35
wnt6a / wingless-type MMTV integration site family, member 6a	ENSDARG00000038283	34

Protein motifs (from Interpro)

Interpro ID	Name
IPR005817	Wnt
IPR013304	Wnt-16 protein

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0002244	hematopoietic progenitor cell differentiation	IMP
biological_process	GO:0007219	Notch signaling pathway	IGI
biological_process	GO:0007275	multicellular organism development	IEA
biological_process	GO:0016055	Wnt signaling pathway	IBA
biological_process	GO:0030182	neuron differentiation	IBA
biological_process	GO:0045165	cell fate commitment	IBA
biological_process	GO:0060218	hematopoietic stem cell differentiation	IMP
biological_process	GO:0072498	embryonic skeletal joint development	IMP
biological_process	GO:1902036	regulation of hematopoietic stem cell differentiation	IMP
cellular_component	GO:0005576	extracellular region	IEA
cellular_component	GO:0005615	extracellular space	IBA
molecular_function	GO:0005102	signaling receptor binding	IEA
molecular_function	GO:0005109	frizzled binding	IBA

Pathways (from Reactome)

Pathway description

WNT ligand biogenesis and trafficking

Phenotype (from MGI, Zfin or HPO)

ID	Phenotype	Definition	Genetic BG
ZFA:0000155	somite	somite decreased amount , abnormal	Show
ZFA:0000422	retroarticular	retroarticular cell proliferation decreased occurrence , abnormal	Show
ZFA:0001078	thymus	thymus T cell absent , abnormal	Show
ZFA:0001115	trunk	trunk altered number of intersegmental vessel , abnormal	Show
ZFA:0001205	Meckel s cartilage	Meckels cartilage joint morphology , abnormal	Show
ZFA:0001285	intersegmental vessel	intersegmental vessel spatial pattern , abnormal	Show
ZFA:0001399	palatoquadrate cartilage	palatoquadrate cartilage joint morphology , abnormal	Show
ZFA:0001596	joint	joint cell proliferation decreased occurrence , abnormal joint cell migration decreased occurrence , abnormal	Show
ZFA:0005028	ventral wall of dorsal aorta	ventral wall of dorsal aorta decreased amount , abnormal ventral wall of dorsal aorta hematopoietic stem cell decreased amount , abnormal ventral wall of dorsal aorta amount , ameliorated	Show
ZFA:0009014	hematopoietic stem cell	hematopoietic stem cell absent , abnormal	Show

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

1 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr