ENSDARG00000016854


Danio rerio

Features
Gene ID: ENSDARG00000016854
  
Biological name :neurod2
  
Synonyms : neurod2 / neurogenic differentiation 2
  
Possible biological names infered from orthology : neuronal differentiation 2 / Q15784 / Q62414
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 14920088
Gene end: 14922955
  
Corresponding Affymetrix probe sets: Dr.5740.1.S1_at (Zebrafish Array)   NM_131082_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000023642
NCBI entrez gene - 114435     See in Manteia.
RefSeq - NM_131082
RefSeq Peptide - NP_571157
swissprot - B3DFQ6
ZFIN ID - ZDB-GENE-010608-3
Ensembl - ENSDARG00000016854
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NEUROD2ENSGALG00000039633Gallus gallus
 Q15784ENSG00000171532Homo sapiens
 Q62414ENSMUSG00000038255Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
O42202 / neurod1 / neuronal differentiation 1 / Q13562* / Q60867* / Neurogenic differentiation factor 1 *ENSDARG0000001956644
Q6NYU3 / neurod6a / neuronal differentiation 6a / Q96NK8* / P48986* / NEUROD6* / neuronal differentiation 6* / neurogenic differentiation 6*ENSDARG0000004000840
Q9W6C7 / neurod6b / neuronal differentiation 6b / Q96NK8* / NEUROD6* / neuronal differentiation 6*ENSDARG0000002079438
neurod4 / neuronal differentiation 4 / O09105* / Q9HD90* / neurogenic differentiation 4*ENSDARG0000000346937
O42606 / neurog1 / neurogenin 1 / Q9H2A3* / NEUROG2* / neurogenin 2*ENSDARG0000005613016
neurog3 / neurogenin 3 / P70661* / Q9Y4Z2*ENSDARG0000001695115
atoh7 / Q8AW52 / atonal bHLH transcription factor 7 / 7 * / Q8N100* / Q9Z2E5*ENSDARG0000006955213
bhlha15 / basic helix-loop-helix family, member a15 / Q7RTS1* / Q9QYC3* / Class A basic helix-loop-helix protein 15 *ENSDARG0000004516613
atoh1a / atonal bHLH transcription factor 1a / 1 * / ATOH1* / P48985* / Q92858* / atonal bHLH transcription factor 1*ENSDARG0000005529412
atoh8 / D2CLZ9 / atonal bHLH transcription factor 8 / 8 * / Q96SQ7* / Q99NA2*ENSDARG0000003755512
atoh1c / atonal bHLH transcription factor 1cENSDARG0000003960211
BX957231.1ENSDARG000001147485


Protein motifs (from Interpro)
Interpro ID Name
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain
 IPR016637  Neurogenic differentiation factor NeuroD
 IPR022575  Neurogenic differentiation factor, domain of unknown function
 IPR032649  Neurogenic differentiation factor 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0045664 regulation of neuron differentiation IEA
 biological_processGO:0090128 regulation of synapse maturation IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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