ENSDARG00000020405


Danio rerio

Features
Gene ID: ENSDARG00000020405
  
Biological name :napab
  
Synonyms : napab / N-ethylmaleimide-sensitive factor attachment protein, alpha b
  
Possible biological names infered from orthology : Alpha-soluble NSF attachment protein / NAPA / NSF attachment protein alpha / P54920 / Q9DB05
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 44673990
Gene end: 44696815
  
Corresponding Affymetrix probe sets: Dr.5631.1.A1_at (Zebrafish Array)   Dr.5631.2.S1_at (Zebrafish Array)   NM_199766_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000009285
NCBI entrez gene - 327082     See in Manteia.
RefSeq - NM_199766
RefSeq Peptide - NP_956060
swissprot - Q7T2F5
ZFIN ID - ZDB-GENE-030131-5290
Ensembl - ENSDARG00000020405
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NAPAENSG00000105402Homo sapiens
 NapaENSMUSG00000006024Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
napbb / N-ethylmaleimide-sensitive factor attachment protein, beta b / NAPB* / Q9H115* / P28663* / NSF attachment protein beta* / Beta-soluble NSF attachment protein *ENSDARG0000006910178
napba / N-ethylmaleimide-sensitive factor attachment protein, beta a / NAPB* / Q9H115* / P28663* / NSF attachment protein beta* / Beta-soluble NSF attachment protein *ENSDARG0000001366977
napaa / N-ethylmaleimide-sensitive factor attachment protein, alpha a / NAPA* / Q9DB05* / P54920* / NSF attachment protein alpha* / Alpha-soluble NSF attachment protein *ENSDARG0000006760577


Protein motifs (from Interpro)
Interpro ID Name
 IPR000744  NSF attachment protein
 IPR011990  Tetratricopeptide-like helical domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0035494 SNARE complex disassembly IBA
 biological_processGO:0061025 membrane fusion IBA
 cellular_componentGO:0005774 vacuolar membrane IBA
 cellular_componentGO:0031201 SNARE complex IBA
 molecular_functionGO:0005483 soluble NSF attachment protein activity IBA
 molecular_functionGO:0019905 syntaxin binding IBA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
Golgi Associated Vesicle Biogenesis
COPI-mediated anterograde transport
COPI-dependent Golgi-to-ER retrograde traffic
Intra-Golgi traffic
Retrograde transport at the Trans-Golgi-Network


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000034885 bet1 / Bet1 golgi vesicular membrane trafficking protein / O15155* / O35623* / BET1 homolog *  / reaction / complex
 ENSDARG00000032037 bet1l / Q68EL3 / Bet1 golgi vesicular membrane trafficking protein-like / Q9NYM9* / O35153* / Gm45785* / BET1-like protein *  / complex / reaction
 ENSDARG00000035763 stx18 / Q4VBI7 / syntaxin 18 / Q9P2W9*  / reaction / complex
 ENSDARG00000045065 vti1a / vesicle transport through interaction with t-SNAREs 1A / O89116* / Q96AJ9*  / complex / reaction
 ENSDARG00000038991 nsfb / N-ethylmaleimide-sensitive factor b / NSF* / P46459* / P46460* / Vesicle-fusing ATPase * / N-ethylmaleimide sensitive factor, vesicle fusing ATPase*  / complex / reaction
 ENSDARG00000003307 stx16 / syntaxin 16 / Q8BVI5* / O14662* / STX16-NPEPL1* / STX16-NPEPL1 readthrough (NMD candidate)*  / reaction / complex
 ENSDARG00000053070 gosr2 / golgi SNAP receptor complex member 2 / O14653* / O35166* / AC005670.2*  / reaction / complex
 ENSDARG00000070161 vamp3 / vesicle-associated membrane protein 3 (cellubrevin) / P63024* / Q15836* / vesicle associated membrane protein 3*  / complex / reaction
 ENSDARG00000043510 vamp4 / vesicle-associated membrane protein 4 / O70480* / O75379*  / complex / reaction
 ENSDARG00000026654 gosr1 / golgi SNAP receptor complex member 1 / O88630* / O95249*  / reaction / complex
 ENSDARG00000007654 nsfa / N-ethylmaleimide-sensitive factor a / NSF* / P46459* / P46460* / Vesicle-fusing ATPase * / N-ethylmaleimide sensitive factor, vesicle fusing ATPase*  / reaction / complex
 ENSDARG00000025033 stx5a / syntaxin 5A / STX5* / Q8K1E0* / Q13190* / syntaxin 5*  / reaction / complex
 ENSDARG00000042742 stx6 / syntaxin 6 / O43752*  / complex / reaction
 ENSDARG00000100435 Q7SXP0 / sec22bb / SEC22 homolog B, vesicle trafficking protein b / SEC22B* / O08547* / O75396* / Vesicle-trafficking protein SEC22b * / SEC22 homolog B, vesicle trafficking protein (gene/p...  / reaction / complex
 ENSDARG00000020405 napab / N-ethylmaleimide-sensitive factor attachment protein, alpha b / NAPA* / Q9DB05* / P54920* / NSF attachment protein alpha* / Alpha-soluble NSF attachment protein *  / complex / reaction
 ENSDARG00000078259 bnip1a / BCL2 interacting protein 1a / BNIP1* / Q6QD59* / Q12981* / BCL2 interacting protein 1* / Vesicle transport protein SEC20 *  / reaction / complex
 ENSDARG00000075030 stx10 / syntaxin 10 / O60499*  / reaction / complex
 ENSDARG00000104280 bnip1b / BCL2 interacting protein 1b / BNIP1* / Q12981* / BCL2 interacting protein 1*  / reaction / complex






 

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