ENSDARG00000029250


Danio rerio

Features
Gene ID: ENSDARG00000029250
  
Biological name :poli
  
Synonyms : poli / polymerase (DNA directed) iota
  
Possible biological names infered from orthology : DNA polymerase iota / Q9UNA4
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 18912950
Gene end: 18924834
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000041370
NCBI entrez gene - 550532     See in Manteia.
RefSeq - NM_001017834
RefSeq - XM_017356084
RefSeq Peptide - NP_001017834
swissprot - A2CEB0
ZFIN ID - ZDB-GENE-050417-376
Ensembl - ENSDARG00000029250
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 POLIENSG00000101751Homo sapiens
 PoliENSMUSG00000038425Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
polk / polymerase (DNA directed) kappa / Q9QUG2* / Q9UBT6* / DNA polymerase kappa*ENSDARG0000005996320
polh / polymerase (DNA directed), eta / Q9JJN0* / Q9Y253* / DNA polymerase eta*ENSDARG0000007023119
rev1 / REV1, polymerase (DNA directed) / Q9UBZ9* / Q920Q2* / DNA repair protein REV1 * / REV1, DNA directed polymerase*ENSDARG0000001829618


Protein motifs (from Interpro)
Interpro ID Name
 IPR001126  UmuC domain
 IPR017061  DNA polymerase eta/kappa/iota/IV
 IPR017961  DNA polymerase, Y-family, little finger domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair IEA
 molecular_functionGO:0003684 damaged DNA binding IEA


Pathways (from Reactome)
Pathway description
Translesion synthesis by POLI
Termination of translesion DNA synthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000003938 rpa1 / Q6NY74 / replication protein A1 / Q8VEE4* / P27694* / Replication protein A 70 kDa DNA-binding subunit *  / complex / reaction
 ENSDARG00000037188 rpa2 / replication protein A2 / RPA4* / Q13156* / P15927* / replication protein A4*  / complex / reaction
 ENSDARG00000054155 pcna / Q9PTP1 / proliferating cell nuclear antigen / P17918* / P12004* / Pcna-ps2*  / complex / reaction
 ENSDARG00000042456 MAD2L2 / Q568H3 / zgc:110299 / Q9D752* / Q9UI95* / mitotic arrest deficient 2 like 2* / Mitotic spindle assembly checkpoint protein MAD2B *  / reaction / complex
 ENSDARG00000058801 rev3l / REV3-like, polymerase (DNA directed), zeta, catalytic subunit / Q61493* / O60673* / DNA polymerase zeta catalytic subunit * / REV3 like, DNA directed polymerase zeta catalytic subunit*  / reaction / complex
 ENSDARG00000018296 rev1 / REV1, polymerase (DNA directed) / Q9UBZ9* / Q920Q2* / DNA repair protein REV1 * / REV1, DNA directed polymerase*  / reaction / complex






 

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