ENSDARG00000057004


Danio rerio

Features
Gene ID: ENSDARG00000057004
  
Biological name :si:ch211-287a12.9
  
Synonyms : si:ch211-287a12.9
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 24682307
Gene end: 24689725
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000074019
Ensembl peptide - ENSDARP00000145366
NCBI entrez gene - 563523     See in Manteia.
RefSeq - XM_017358048
swissprot - F1QG23
ZFIN ID - ZDB-GENE-130530-668
Ensembl - ENSDARG00000057004
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000017029Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fgl1 / fibrinogen-like 1 / Q08830*ENSDARG0000010538040
fgg / fibrinogen gamma chain / P02679* / Q8VCM7*ENSDARG0000003728136
fgb / fibrinogen beta chain / P02675* / Q8K0E8* / Fibrinogen beta chain Fibrinopeptide B Fibrinogen beta chain*ENSDARG0000000896933
tnr / tenascin R (restrictin, janusin) / Q8BYI9* / Q92752* / tenascin R*ENSDARG0000002077130
fga / fibrinogen alpha chain / E9PV24* / P02671* / Fibrinogen alpha chain Fibrinopeptide A Fibrinogen alpha chain*ENSDARG0000002074130
tnn / tenascin N / Q80Z71* / Q9UQP3*ENSDARG0000002482930
angptl3 / angiopoietin-like 3 / Q9R182* / Q9Y5C1* / Angiopoietin-related protein 3 ANGPTL3(17-224)*ENSDARG0000004436528
tnxba / tenascin XBa / TNXB* / P22105* / tenascin XB*ENSDARG0000000176028
tnc / tenascin C / P24821* / Q80YX1*ENSDARG0000002194828
zmp:0000000846 / TNC* / P24821* / tenascin C*ENSDARG0000007836227
angptl4 / angiopoietin-like 4 / Q9BY76* / Q9Z1P8* / Angiopoietin-related protein 4 *ENSDARG0000003585926
zgc:194887ENSDARG0000009858625
angptl5 / angiopoietin-like 5 / Q86XS5*ENSDARG0000005663024
fn1a / fibronectin 1a / FN1* / P02751* / P11276* / fibronectin 1* / Fibronectin Anastellin*ENSDARG0000001981518
fn1b / fibronectin 1b / FN1* / P02751* / P11276* / fibronectin 1* / Fibronectin Anastellin*ENSDARG0000000652618


Protein motifs (from Interpro)
Interpro ID Name
 IPR002181  Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
 IPR014715  Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2
 IPR014716  Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1
 IPR020837  Fibrinogen, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001889 liver development IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000123 liver liver decreased size , abnormal
liver decreased distribution , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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