ENSDARG00000078362


Danio rerio

Features
Gene ID: ENSDARG00000078362
  
Biological name :zmp:0000000846
  
Synonyms : zmp:0000000846
  
Possible biological names infered from orthology : P24821 / Q80YX1 / tenascin C / TNC
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 5708576
Gene end: 5831037
  
Corresponding Affymetrix probe sets: Dr.22690.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000098154
NCBI entrez gene - 100149028     See in Manteia.
swissprot - E7EZJ2
ZFIN ID - ZDB-GENE-130530-849
Ensembl - ENSDARG00000078362
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TNCENSGALG00000039990Gallus gallus
 TNCENSG00000041982Homo sapiens
 TncENSMUSG00000028364Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tnc / tenascin C / P24821* / Q80YX1*ENSDARG0000002194863
tnr / tenascin R (restrictin, janusin) / Q8BYI9* / Q92752* / tenascin R*ENSDARG0000002077137
tnn / tenascin N / Q80Z71* / Q9UQP3*ENSDARG0000002482924
fn1a / fibronectin 1a / FN1* / P02751* / P11276* / fibronectin 1* / Fibronectin Anastellin*ENSDARG0000001981522
fn1b / fibronectin 1b / FN1* / P02751* / P11276* / fibronectin 1* / Fibronectin Anastellin*ENSDARG0000000652622
tnxba / tenascin XBa / TNXB* / P22105* / tenascin XB*ENSDARG0000000176019
fga / fibrinogen alpha chain / E9PV24* / P02671* / Fibrinogen alpha chain Fibrinopeptide A Fibrinogen alpha chain*ENSDARG000000207418
angptl3 / angiopoietin-like 3 / Q9R182* / Q9Y5C1* / Angiopoietin-related protein 3 ANGPTL3(17-224)*ENSDARG000000443657
fgl1 / fibrinogen-like 1 / Q08830*ENSDARG000001053807
fgb / fibrinogen beta chain / P02675* / Q8K0E8* / Fibrinogen beta chain Fibrinopeptide B Fibrinogen beta chain*ENSDARG000000089697
angptl4 / angiopoietin-like 4 / Q9BY76* / Q9Z1P8* / Angiopoietin-related protein 4 *ENSDARG000000358597
angptl5 / angiopoietin-like 5 / Q86XS5*ENSDARG000000566306
fgg / fibrinogen gamma chain / P02679* / Q8VCM7*ENSDARG000000372816
si:ch211-287a12.9ENSDARG000000570046
zgc:194887ENSDARG000000985865


Protein motifs (from Interpro)
Interpro ID Name
 IPR000742  EGF-like domain
 IPR002181  Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
 IPR003961  Fibronectin type III
 IPR013032  EGF-like, conserved site
 IPR013111  EGF-like domain, extracellular
 IPR013783  Immunoglobulin-like fold
 IPR014715  Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2
 IPR014716  Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1
 IPR033078  Tenascin-C


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0042127 regulation of cell proliferation IEA
 cellular_componentGO:0031012 extracellular matrix IEA


Pathways (from Reactome)
Pathway description
Integrin cell surface interactions
ECM proteoglycans
Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)
Post-translational protein phosphorylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000032435 itga9 / integrin, alpha 9 / Q13797* / integrin subunit alpha 9*  / reaction / complex
 ENSDARG00000021948 tnc / tenascin C / P24821* / Q80YX1*  / complex
 ENSDARG00000071863 itgb1a / integrin, beta 1a / ITGB1* / P05556* / P09055* / Integrin beta-1 * / integrin subunit beta 1*  / reaction / complex
 ENSDARG00000006526 fn1b / fibronectin 1b / FN1* / P02751* / P11276* / fibronectin 1* / Fibronectin Anastellin*  / reaction / complex
 ENSDARG00000019815 fn1a / fibronectin 1a / FN1* / P02751* / P11276* / fibronectin 1* / Fibronectin Anastellin*  / complex / reaction
 ENSDARG00000078362 zmp:0000000846 / TNC* / P24821* / tenascin C*  / complex






 

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