ENSDARG00000062244


Danio rerio

Features
Gene ID: ENSDARG00000062244
  
Biological name :setd2
  
Synonyms : setd2 / SET domain containing 2
  
Possible biological names infered from orthology : E9Q5F9 / Histone-lysine N-methyltransferase SETD2 / Q9BYW2
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 16253710
Gene end: 16304147
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000151105
Ensembl peptide - ENSDARP00000114457
Ensembl peptide - ENSDARP00000146765
Ensembl peptide - ENSDARP00000147787
NCBI entrez gene - 794199     See in Manteia.
RefSeq - XM_009292184
RefSeq - XM_021466881
swissprot - F1QJI9
ZFIN ID - ZDB-GENE-030131-2140
Ensembl - ENSDARG00000062244
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SETD2ENSGALG00000042051Gallus gallus
 SETD2ENSG00000181555Homo sapiens
 Setd2ENSMUSG00000044791Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ash1l / ash1 (absent, small, or homeotic)-like (Drosophila) / Q99MY8* / Q9NR48* / Histone-lysine N-methyltransferase ASH1L * / ASH1 like histone lysine methyltransferase*ENSDARG0000007098111
nsd1a / nuclear receptor binding SET domain protein 1a / NSD1* / Q96L73* / nuclear receptor binding SET domain protein 1*ENSDARG000000600167
nsd1b / nuclear receptor binding SET domain protein 1b / NSD1* / Q96L73* / nuclear receptor binding SET domain protein 1*ENSDARG000000607056
nsd3 / nuclear receptor binding SET domain protein 3 / Q6P2L6* / Q9BZ95* / Histone-lysine N-methyltransferase NSD3 *ENSDARG000000627656
nsd2 / nuclear receptor binding SET domain protein 2 / O96028* / Q8BVE8* / Histone-lysine N-methyltransferase NSD2 *ENSDARG000000262256
ehmt1b / euchromatic histone-lysine N-methyltransferase 1b / EHMT1* / Q5DW34* / Q9H9B1* / Histone-lysine N-methyltransferase EHMT1 * / euchromatic histone lysine methyltransferase 1*ENSDARG000000266344
ehmt2 / euchromatic histone-lysine N-methyltransferase 2 / Q96KQ7* / euchromatic histone lysine methyltransferase 2*ENSDARG000001023254
Q1L8U8 / setdb1a / SET domain, bifurcated 1aENSDARG000000412434
setdb1b / SET domain, bifurcated 1b / Q15047* / SETDB1* / SET domain bifurcated 1*ENSDARG000000990214
Q6DGD3 / suv39h1a / suppressor of variegation 3-9 homolog 1a / O54864* / O43463* / SUV39H1* / suppressor of variegation 3-9 1* / suppressor of variegation 3-9 homolog 1*ENSDARG000000267993
ezh2 / enhancer of zeste 2 polycomb repressive complex 2 subunit / Q15910* / Q61188* / Histone-lysine N-methyltransferase EZH2 *ENSDARG000000105713
setbp1 / SET binding protein 1 / Q9Y6X0* / Q9Z180* / SET-binding protein *ENSDARG000000937993
suv39h1b / suppressor of variegation 3-9 homolog 1b / O54864* / O43463* / SUV39H1* / suppressor of variegation 3-9 1* / suppressor of variegation 3-9 homolog 1*ENSDARG000000557533
ehmt1a / euchromatic histone-lysine N-methyltransferase 1a / EHMT1* / Q5DW34* / Q9H9B1* / Histone-lysine N-methyltransferase EHMT1 * / euchromatic histone lysine methyltransferase 1*ENSDARG000000681573
setmar / SET domain and mariner transposase fusion gene / Q53H47* / Q80UJ9* / Histone-lysine N-methyltransferase SETMAR *ENSDARG000000748362
ezh1 / enhancer of zeste 1 polycomb repressive complex 2 subunitENSDARG000000378940


Protein motifs (from Interpro)
Interpro ID Name
 IPR001202  WW domain
 IPR001214  SET domain
 IPR003616  Post-SET domain
 IPR006560  AWS domain
 IPR013257  Set2 Rpb1 interacting domain
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0032259 methylation IEA
 biological_processGO:0034968 histone lysine methylation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005694 chromosome IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0018024 histone-lysine N-methyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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