Manteia

ENSDARG00000079500

Danio rerio

Features

Gene ID:	ENSDARG00000079500

Biological name :	kif3cb

Synonyms :	kif3cb / kinesin family member 3Cb

Possible biological names infered from orthology :	KIF3C / kinesin family member 3C / Kinesin-like protein KIF3C / O14782 / O35066

Species:	Danio rerio

Chr. number:	17
Strand:	-1
Band:
Gene start:	37204229
Gene end:	37214196

Corresponding Affymetrix probe sets:

Cross references:	Ensembl peptide - ENSDARP00000110576 NCBI entrez gene - 550547 See in Manteia. RefSeq - NM_001017849 RefSeq Peptide - NP_001017849 swissprot - F1QW58 ZFIN ID - ZDB-GENE-080709-4 Ensembl - ENSDARG00000079500

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
KIF3C	ENSGALG00000026973	Gallus gallus
KIF3C	ENSG00000084731	Homo sapiens
Kif3c	ENSMUSG00000020668	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
kif3ca / kinesin family member 3Ca / KIF3C* / O14782* / kinesin family member 3C*	ENSDARG00000017162	63
kif3b / kinesin family member 3B / O15066* / Q61771* / Kinesin-like protein KIF3B Kinesin-like protein KIF3B, N-terminally processed*	ENSDARG00000101120	60
kif3a / kinesin family member 3A / P28741* / Q9Y496* / Kinesin-like protein KIF3A *	ENSDARG00000087538	41
kif17 / kinesin family member 17 / Q99PW8* / Q9P2E2* / Kinesin-like protein KIF17 *	ENSDARG00000055238	36
kif11 / kinesin family member 11 / P52732* / Q6P9P6* / Kinesin-like protein KIF11 *	ENSDARG00000010948	29
kif4 / kinesin family member 4 / KIF4A* / KIF4B* / Q2VIQ3* / O95239* / P33174* / kinesin family member 4A* / kinesin family member 4B* / Chromosome-associated kinesin KIF4 *	ENSDARG00000005462	26
kif5c / kinesin family member 5C / O60282* / P28738* / Kinesin heavy chain isoform 5C *	ENSDARG00000076027	26
kif5ba / kinesin family member 5B, a / KIF5B* / Q61768* / P33176* / Kinesin-1 heavy chain * / kinesin family member 5B*	ENSDARG00000074131	26
kif5aa / kinesin family member 5A, a / KIF5A* / Q12840* / kinesin family member 5A*	ENSDARG00000098936	26
kif15 / kinesin family member 15 / Q6P9L6* / Q9NS87* / Kinesin-like protein KIF15 *	ENSDARG00000012073	26
kif21a / kinesin family member 21A / Q7Z4S6* / Q9QXL2* / Kinesin-like protein KIF21A *	ENSDARG00000061131	25
kif5ba / kif5bb / kinesin family member 5B, b / KIF5B* / P33176* / kinesin family member 5B*	ENSDARG00000103394	25
kif7 / kinesin family member 7 / Q2M1P5*	ENSDARG00000033099	25
cenpe / centromere protein E / Q02224*	ENSDARG00000063385	25
kif21b / kinesin family member 21B / O75037*	ENSDARG00000009733	24
kif5ab / kinesin family member 5A, b / KIF5A* / P33175* / Q12840* / kinesin family member 5A* / Kinesin heavy chain isoform 5A *	ENSDARG00000059818	24
CABZ01066312.1	ENSDARG00000100624	2

Protein motifs (from Interpro)

Interpro ID	Name
IPR001752	Kinesin motor domain
IPR019821	Kinesin motor domain, conserved site
IPR027417	P-loop containing nucleoside triphosphate hydrolase

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0007018	microtubule-based movement	IEA
biological_process	GO:0030705	cytoskeleton-dependent intracellular transport	IBA
cellular_component	GO:0005871	kinesin complex	IBA
cellular_component	GO:0005874	microtubule	IEA
molecular_function	GO:0000166	nucleotide binding	IEA
molecular_function	GO:0003774	motor activity	IEA
molecular_function	GO:0003777	microtubule motor activity	IBA
molecular_function	GO:0005524	ATP binding	IEA
molecular_function	GO:0008017	microtubule binding	IEA
molecular_function	GO:0016887	ATPase activity	IBA

Pathways (from Reactome)

Pathway description

Intraflagellar transport

Phenotype (from MGI, Zfin or HPO)

ID	Phenotype	Definition	Genetic BG
ZFA:0001466	photoreceptor outer segment layer	photoreceptor outer segment layer photoreceptor connecting cilium decreased variability of size , abnormal photoreceptor outer segment layer photoreceptor connecting cilium decreased length , abnormal	Show

Interacting proteins (from Reactome)

Interactor ID	Name	Interaction type
ENSDARG00000006862	kifap3b / kinesin-associated protein 3b / Q92845* / KIFAP3* / P70188* / kinesin associated protein 3*	/ complex
ENSDARG00000087538	kif3a / kinesin family member 3A / P28741* / Q9Y496* / Kinesin-like protein KIF3A *	/ complex
ENSDARG00000040556	ift20 / intraflagellar transport 20 homolog (Chlamydomonas) / Q8IY31* / Q61025* / Intraflagellar transport * / intraflagellar transport 20*	/ complex

0 s.

External programs and data are copyrighted by and are the property of their respective authors. The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation
		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr