ENSDARG00000101120


Danio rerio

Features
Gene ID: ENSDARG00000101120
  
Biological name :kif3b
  
Synonyms : kif3b / kinesin family member 3B
  
Possible biological names infered from orthology : Kinesin-like protein KIF3B Kinesin-like protein KIF3B, N-terminally processed / O15066 / Q61771
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 7710447
Gene end: 7736719
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000137478
Ensembl peptide - ENSDARP00000133077
Ensembl peptide - ENSDARP00000150665
NCBI entrez gene - 100101641     See in Manteia.
RefSeq - NM_001100145
RefSeq - XM_005174101
RefSeq Peptide - NP_001093615
swissprot - F1QN54
swissprot - A0A0J9YJF3
ZFIN ID - ZDB-GENE-050119-3
Ensembl - ENSDARG00000101120
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 KIF3BENSGALG00000006604Gallus gallus
 KIF3BENSG00000101350Homo sapiens
 Kif3bENSMUSG00000027475Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
kif3ca / kinesin family member 3Ca / KIF3C* / O14782* / kinesin family member 3C*ENSDARG0000001716266
kif3cb / kinesin family member 3Cb / KIF3C* / O14782* / O35066* / kinesin family member 3C* / Kinesin-like protein KIF3C *ENSDARG0000007950059
kif3a / kinesin family member 3A / P28741* / Q9Y496* / Kinesin-like protein KIF3A *ENSDARG0000008753844
kif17 / kinesin family member 17 / Q99PW8* / Q9P2E2* / Kinesin-like protein KIF17 *ENSDARG0000005523838
kif11 / kinesin family member 11 / P52732* / Q6P9P6* / Kinesin-like protein KIF11 *ENSDARG0000001094828
kif15 / kinesin family member 15 / Q6P9L6* / Q9NS87* / Kinesin-like protein KIF15 *ENSDARG0000001207327
kif5c / kinesin family member 5C / O60282* / P28738* / Kinesin heavy chain isoform 5C *ENSDARG0000007602727
kif5aa / kinesin family member 5A, a / KIF5A* / Q12840* / kinesin family member 5A*ENSDARG0000009893627
kif21a / kinesin family member 21A / Q7Z4S6* / Q9QXL2* / Kinesin-like protein KIF21A *ENSDARG0000006113126
kif5ba / kinesin family member 5B, a / KIF5B* / Q61768* / P33176* / Kinesin-1 heavy chain * / kinesin family member 5B*ENSDARG0000007413126
kif4 / kinesin family member 4 / KIF4A* / KIF4B* / Q2VIQ3* / O95239* / P33174* / kinesin family member 4A* / kinesin family member 4B* / Chromosome-associated kinesin KIF4 *ENSDARG0000000546226
kif7 / kinesin family member 7 / Q2M1P5*ENSDARG0000003309926
cenpe / centromere protein E / Q02224*ENSDARG0000006338526
kif5ba / kif5bb / kinesin family member 5B, b / KIF5B* / P33176* / kinesin family member 5B*ENSDARG0000010339426
kif5ab / kinesin family member 5A, b / KIF5A* / P33175* / Q12840* / kinesin family member 5A* / Kinesin heavy chain isoform 5A *ENSDARG0000005981825
kif21b / kinesin family member 21B / O75037*ENSDARG0000000973325
CABZ01066312.1ENSDARG000001006242


Protein motifs (from Interpro)
Interpro ID Name
 IPR001752  Kinesin motor domain
 IPR019821  Kinesin motor domain, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007018 microtubule-based movement IEA
 biological_processGO:0030705 cytoskeleton-dependent intracellular transport IBA
 biological_processGO:0035845 photoreceptor cell outer segment organization IGI
 biological_processGO:0043584 nose development IMP
 biological_processGO:0046530 photoreceptor cell differentiation IMP
 biological_processGO:0048793 pronephros development IMP
 biological_processGO:0048839 inner ear development IMP
 biological_processGO:0048884 neuromast development IMP
 biological_processGO:0060041 retina development in camera-type eye IMP
 biological_processGO:0060042 retina morphogenesis in camera-type eye IMP
 cellular_componentGO:0005871 kinesin complex IDA
 cellular_componentGO:0005874 microtubule IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003774 motor activity IEA
 molecular_functionGO:0003777 microtubule motor activity IBA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008017 microtubule binding IEA
 molecular_functionGO:0016887 ATPase activity IBA


Pathways (from Reactome)
Pathway description
Intraflagellar transport
Kinesins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain hydrocephalic , abnormal
Show

 ZFA:0000046 retinal neural layer retinal neural layer morphology , abnormal
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 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000137 optic stalk optic stalk morphology , abnormal
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 ZFA:0000143 retinal photoreceptor layer retinal photoreceptor layer axoneme absent , abnormal
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 ZFA:0000150 pronephric duct pronephric duct cilium absent , abnormal
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 ZFA:0000166 lateral crista lateral crista cilium decreased variability of size , abnormal
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 ZFA:0000168 anterior macula anterior macula cilium absent , abnormal
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 ZFA:0000554 olfactory epithelium olfactory epithelium cilium decreased length , abnormal
olfactory epithelium cilium decreased amount , abnormal
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 ZFA:0000940 posterior lateral line neuromast posterior lateral line neuromast cilium absent , abnormal
posterior lateral line neuromast cilium decreased length , abnormal
posterior lateral line neuromast cilium decreased amount , abnormal
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 ZFA:0001094 whole organism whole organism curved ventral , abnormal
whole organism curved , abnormal
whole organism lethal (sensu genetics) , abnormal
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 ZFA:0001466 photoreceptor outer segment layer photoreceptor outer segment layer photoreceptor connecting cilium decreased length , abnormal
photoreceptor outer segment layer absent , abnormal
photoreceptor outer segment layer aplastic , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000006862 kifap3b / kinesin-associated protein 3b / Q92845* / KIFAP3* / P70188* / kinesin associated protein 3*  / complex
 ENSDARG00000087538 kif3a / kinesin family member 3A / P28741* / Q9Y496* / Kinesin-like protein KIF3A *  / complex
 ENSDARG00000101120 kif3b / kinesin family member 3B / O15066* / Q61771* / Kinesin-like protein KIF3B Kinesin-like protein KIF3B, N-terminally processed*  / complex
 ENSDARG00000040556 ift20 / intraflagellar transport 20 homolog (Chlamydomonas) / Q8IY31* / Q61025* / Intraflagellar transport * / intraflagellar transport 20*  / complex






 

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