ENSDARG00000101508


Danio rerio

Features
Gene ID: ENSDARG00000101508
  
Biological name :nr6a1a
  
Synonyms : nr6a1a / nuclear receptor subfamily 6, group A, member 1a
  
Possible biological names infered from orthology : NR6A1 / nuclear receptor subfamily 6 group A member 1 / Q15406 / Q64249
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 52888295
Gene end: 53044300
  
Corresponding Affymetrix probe sets: Dr.8104.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000130860
Ensembl peptide - ENSDARP00000137098
Ensembl peptide - ENSDARP00000150789
NCBI entrez gene - 30506     See in Manteia.
swissprot - A0A0R4ILU7
swissprot - B3DH62
ZFIN ID - ZDB-GENE-991207-19
Ensembl - ENSDARG00000101508
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NR6A1ENSGALG00000001073Gallus gallus
 NR6A1ENSG00000148200Homo sapiens
 Nr6a1ENSMUSG00000063972Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nr6a1b / nuclear receptor subfamily 6, group A, member 1bENSDARG0000001448056
nr1d2b / nuclear receptor subfamily 1, group D, member 2b / NR1D2* / Q60674* / Q14995* / nuclear receptor subfamily 1 group D member 2*ENSDARG0000000959423
nr1d1 / nuclear receptor subfamily 1, group d, member 1 / P20393* / Q3UV55*ENSDARG0000003316022
nr5a5 / nuclear receptor subfamily 5, group A, member 5ENSDARG0000003911621
nr5a2 / nuclear receptor subfamily 5, group A, member 2 / O00482*ENSDARG0000010094021
nr5a1b / nuclear receptor subfamily 5, group A, member 1b / NR5A1* / P33242* / Q13285* / Steroidogenic factor 1 * / nuclear receptor subfamily 5 group A member 1*ENSDARG0000002336220
nr1d2a / nuclear receptor subfamily 1, group D, member 2aENSDARG0000000382019
nr1d4a / nuclear receptor subfamily 1, group D, member 4aENSDARG0000003116119
nr5a1a / nuclear receptor subfamily 5, group A, member 1a / NR5A1* / P33242* / Q13285* / Steroidogenic factor 1 * / nuclear receptor subfamily 5 group A member 1*ENSDARG0000010317619
nr1d4b / nuclear receptor subfamily 1, group D, member 4bENSDARG0000005937019
pparaa / peroxisome proliferator-activated receptor alpha a / PPARA* / P23204* / Q07869* / peroxisome proliferator activated receptor alpha*ENSDARG0000003177718
ppardb / peroxisome proliferator-activated receptor delta b / PPARD* / P35396* / Q03181* / peroxisome proliferator activated receptor delta*ENSDARG0000000947318
rorcb / RAR-related orphan receptor C bENSDARG0000001778018
rorca / RAR-related orphan receptor C aENSDARG0000005723118
pparda / peroxisome proliferator-activated receptor delta a / PPARD* / P35396* / Q03181* / peroxisome proliferator activated receptor delta*ENSDARG0000004452518
pparab / peroxisome proliferator-activated receptor alpha b / PPARA* / P23204* / Q07869* / peroxisome proliferator activated receptor alpha*ENSDARG0000005432318
roraa / RAR-related orphan receptor A, paralog a / RORA* / P51448* / P35398* / RAR related orphan receptor A* / RAR-related orphan receptor alpha*ENSDARG0000003176817
rorab / RAR-related orphan receptor A, paralog bENSDARG0000000191016
rorb / RAR-related orphan receptor B / Q8R1B8* / Q92753* / Nuclear receptor ROR-beta *ENSDARG0000003349816
rorc / RAR-related orphan receptor C / P51449* / P51450* / Nuclear receptor ROR-gamma *ENSDARG0000008719512


Protein motifs (from Interpro)
Interpro ID Name
 IPR000536  Nuclear hormone receptor, ligand-binding domain
 IPR001628  Zinc finger, nuclear hormone receptor-type
 IPR001723  Nuclear hormone receptor
 IPR013088  Zinc finger, NHR/GATA-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0043401 steroid hormone mediated signaling pathway IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0003707 steroid hormone receptor activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Nuclear Receptor transcription pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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