ENSG00000067082


Homo sapiens

Features
Gene ID: ENSG00000067082
  
Biological name :KLF6
  
Synonyms : KLF6 / Kruppel like factor 6 / Q99612
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: -1
Band: p15.2
Gene start: 3775996
Gene end: 3785281
  
Corresponding Affymetrix probe sets: 1555832_s_at (Human Genome U133 Plus 2.0 Array)   208960_s_at (Human Genome U133 Plus 2.0 Array)   208961_s_at (Human Genome U133 Plus 2.0 Array)   211610_at (Human Genome U133 Plus 2.0 Array)   224606_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000419079
Ensembl peptide - ENSP00000419923
Ensembl peptide - ENSP00000445301
NCBI entrez gene - 1316     See in Manteia.
OMIM - 602053
RefSeq - NM_001160125
RefSeq - NM_001160124
RefSeq - NM_001300
RefSeq Peptide - NP_001153596
RefSeq Peptide - NP_001153597
RefSeq Peptide - NP_001291
swissprot - Q99612
Ensembl - ENSG00000067082
  
Related genetic diseases (OMIM): 176807 - Prostate cancer, somatic, 176807
  613659 - Gastric cancer, somatic, 613659

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 klf6aENSDARG00000029072Danio rerio
 KLF6ENSGALG00000033178Gallus gallus
 Klf6ENSMUSG00000000078Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KLF7 / O75840 / Kruppel like factor 7ENSG0000011826356
KLF5 / Q13887 / Kruppel like factor 5ENSG0000010255441
KLF12 / Q9Y4X4 / Kruppel like factor 12ENSG0000011892235
KLF1 / Q13351 / Kruppel like factor 1ENSG0000010561035
KLF4 / O43474 / Kruppel like factor 4ENSG0000013682634
KLF3 / P57682 / Kruppel like factor 3ENSG0000010978733
KLF8 / O95600 / Kruppel like factor 8ENSG0000010234933
KLF2 / Q9Y5W3 / Kruppel like factor 2ENSG0000012752832
KLF15 / Q9UIH9 / Kruppel like factor 15ENSG0000016388429
KLF17 / Q5JT82 / Kruppel like factor 17ENSG0000017187224
KLF18 / Kruppel like factor 18ENSG0000028303924


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0030183 B cell differentiation NAS
 biological_processGO:0045893 positive regulation of transcription, DNA-templated TAS
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IDA
 cellular_componentGO:0001650 fibrillar center IDA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0001428 Somatic mutation 
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 HP:0012125 Prostate cancer "A cancer of the `prostate` (FMA:9600)." [HPO:probinson]
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 HP:0012126 Stomach cancer "A cancer arising in any part of the stomach." [HPO:probinson]
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 HP:0410067 Increased level of L-fucose in urine "An increase in the level of L-fucose in the urine." [PMID:2311216]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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