ENSG00000112541


Homo sapiens

Features
Gene ID: ENSG00000112541
  
Biological name :PDE10A
  
Synonyms : PDE10A / phosphodiesterase 10A / Q9Y233
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: -1
Band: q27
Gene start: 165327287
Gene end: 165986603
  
Corresponding Affymetrix probe sets: 205501_at (Human Genome U133 Plus 2.0 Array)   211170_s_at (Human Genome U133 Plus 2.0 Array)   211171_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000438284
Ensembl peptide - ENSP00000478556
Ensembl peptide - ENSP00000355847
NCBI entrez gene - 10846     See in Manteia.
OMIM - 610652
RefSeq - XM_017010196
RefSeq - XM_011535387
RefSeq - XM_011535388
RefSeq - XM_011535393
RefSeq - XM_017010194
RefSeq - XM_017010195
RefSeq - NM_001130690
RefSeq - NM_006661
RefSeq - XM_006715321
RefSeq Peptide - NP_001124162
RefSeq Peptide - NP_006652
swissprot - A0A1B1UZR0
swissprot - Q9Y233
swissprot - A0A087WUD0
Ensembl - ENSG00000112541
  
Related genetic diseases (OMIM): 616921 - Dyskinesia, limb and orofacial, infantile-onset, 616921
  616922 - Striatal degeneration, autosomal dominant, 616922
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pde10aENSDARG00000003449Danio rerio
 PDE10AENSGALG00000011537Gallus gallus
 Pde10aENSMUSG00000023868Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PDE5A / O76074 / phosphodiesterase 5AENSG0000013873530
PDE11A / Q9HCR9 / phosphodiesterase 11AENSG0000012865529
PDE2A / O00408 / phosphodiesterase 2AENSG0000018664229
PDE6C / P51160 / phosphodiesterase 6CENSG0000009546426
PDE6A / P16499 / phosphodiesterase 6AENSG0000013291525
PDE11A / phosphodiesterase 11AENSG0000028474125
PDE6B / P35913 / phosphodiesterase 6BENSG0000013325625
PDE3B / Q13370 / phosphodiesterase 3BENSG0000015227015
PDE9A / O76083 / phosphodiesterase 9AENSG0000016019114
PDE3A / Q14432 / phosphodiesterase 3AENSG0000017257214


Protein motifs (from Interpro)
Interpro ID Name
 IPR002073  3"5"-cyclic nucleotide phosphodiesterase, catalytic domain
 IPR003018  GAF domain
 IPR003607  HD/PDEase domain
 IPR023088  3"5"-cyclic nucleotide phosphodiesterase
 IPR023174  3"5"-cyclic nucleotide phosphodiesterase, conserved site
 IPR029016  GAF-like domain superfamily
 IPR036971  3"5"-cyclic nucleotide phosphodiesterase, catalytic domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006198 cAMP catabolic process IEA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway TAS
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0010738 regulation of protein kinase A signaling IEA
 biological_processGO:0043949 regulation of cAMP-mediated signaling IEA
 biological_processGO:0046069 cGMP catabolic process IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0043025 neuronal cell body IEA
 cellular_componentGO:0043204 perikaryon IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004112 cyclic-nucleotide phosphodiesterase activity IEA
 molecular_functionGO:0004114 3",5"-cyclic-nucleotide phosphodiesterase activity TAS
 molecular_functionGO:0004115 3",5"-cyclic-AMP phosphodiesterase activity TAS
 molecular_functionGO:0004118 cGMP-stimulated cyclic-nucleotide phosphodiesterase activity IDA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008081 phosphoric diester hydrolase activity IEA
 molecular_functionGO:0008144 drug binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0030552 cAMP binding NAS
 molecular_functionGO:0030553 cGMP binding NAS
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0047555 3",5"-cyclic-GMP phosphodiesterase activity IEA


Pathways (from Reactome)
Pathway description
cGMP effects
G alpha (s) signalling events


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000739 Anxiety 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001268 Mental deterioration 
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 HP:0001270 Motor retardation 
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 HP:0001300 Parkinsonism 
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0002072 Chorea "Chorea (Greek for dance ) refers to widespread arrhythmic involuntary movements of a forcible, jerky and restless fashion." [HPO:curators]
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 HP:0002307 Drooling 
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 HP:0002310 Orofacial dyskinesia 
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 HP:0002317 Unsteady gait 
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 HP:0002359 Frequent falls 
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 HP:0002487 Hyperkinesis 
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 HP:0002548 Favorable response to levodopa 
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 HP:0003593 Early onset 
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 HP:0003680 Nonprogressive disorder 
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 HP:0008936 Muscular hypotonia of the trunk "Muscular hypotonia (abnormally low muscle tone) affecting the musculature of the trunk." [HPO:curators]
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 HP:0010994 Abnormality of the striatum "Abnormality of the striatum (FMA:77618)." [HPO:probinson]
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0031206 Striatal T2 hyperintensity "Abnormally bright T2 signal from the striatum on brain magnetic resonance imaging." [PMID:27058447]
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 HP:0100660 Dyskinesis "A movement disorder which consists of effects including diminished voluntary movements and the presence of involuntary movements." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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