ENSG00000172572


Homo sapiens

Features
Gene ID: ENSG00000172572
  
Biological name :PDE3A
  
Synonyms : PDE3A / phosphodiesterase 3A / Q14432
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: 1
Band: p12.2
Gene start: 20369245
Gene end: 20684381
  
Corresponding Affymetrix probe sets: 206388_at (Human Genome U133 Plus 2.0 Array)   206389_s_at (Human Genome U133 Plus 2.0 Array)   228507_at (Human Genome U133 Plus 2.0 Array)   236300_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000351957
NCBI entrez gene - 5139     See in Manteia.
OMIM - 123805
RefSeq - XM_017019421
RefSeq - NM_000921
RefSeq - NM_001244683
RefSeq - XM_017019420
RefSeq Peptide - NP_000912
RefSeq Peptide - NP_001231612
swissprot - Q14432
Ensembl - ENSG00000172572
  
Related genetic diseases (OMIM): 112410 - Hypertension and brachydactyly syndrome, 112410
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pde3aENSDARG00000004227Danio rerio
 PDE3AENSGALG00000013143Gallus gallus
 Pde3aENSMUSG00000041741Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PDE3B / Q13370 / phosphodiesterase 3BENSG0000015227043
PDE6C / P51160 / phosphodiesterase 6CENSG0000009546414
PDE6A / P16499 / phosphodiesterase 6AENSG0000013291513
PDE6B / P35913 / phosphodiesterase 6BENSG0000013325613
PDE2A / O00408 / phosphodiesterase 2AENSG0000018664212
PDE11A / Q9HCR9 / phosphodiesterase 11AENSG0000012865511
PDE5A / O76074 / phosphodiesterase 5AENSG0000013873511
PDE9A / O76083 / phosphodiesterase 9AENSG0000016019110
PDE11A / phosphodiesterase 11AENSG0000028474110
PDE10A / Q9Y233 / phosphodiesterase 10AENSG0000011254110


Protein motifs (from Interpro)
Interpro ID Name
 IPR002073  3"5"-cyclic nucleotide phosphodiesterase, catalytic domain
 IPR003607  HD/PDEase domain
 IPR023174  3"5"-cyclic nucleotide phosphodiesterase, conserved site
 IPR036971  3"5"-cyclic nucleotide phosphodiesterase, catalytic domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001556 oocyte maturation IEA
 biological_processGO:0006198 cAMP catabolic process IEA
 biological_processGO:0006629 lipid metabolic process TAS
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway TAS
 biological_processGO:0016101 diterpenoid metabolic process IEA
 biological_processGO:0019933 cAMP-mediated signaling IMP
 biological_processGO:0019934 cGMP-mediated signaling IMP
 biological_processGO:0040020 regulation of meiotic nuclear division IEA
 biological_processGO:0042493 response to drug IEA
 biological_processGO:0043066 negative regulation of apoptotic process IEA
 biological_processGO:0043116 negative regulation of vascular permeability IMP
 biological_processGO:0043117 positive regulation of vascular permeability IMP
 biological_processGO:0051591 response to cAMP IEA
 biological_processGO:0060282 positive regulation of oocyte development IEA
 biological_processGO:0071321 cellular response to cGMP IDA
 biological_processGO:0071560 cellular response to transforming growth factor beta stimulus IEP
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004114 3",5"-cyclic-nucleotide phosphodiesterase activity IEA
 molecular_functionGO:0004115 3",5"-cyclic-AMP phosphodiesterase activity IEA
 molecular_functionGO:0004119 cGMP-inhibited cyclic-nucleotide phosphodiesterase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008081 phosphoric diester hydrolase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0030552 cAMP binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0047555 3",5"-cyclic-GMP phosphodiesterase activity TAS


Pathways (from Reactome)
Pathway description
cGMP effects
G alpha (s) signalling events


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
Show

 HP:0000822 Hypertension "High blood pressure." [HPO:curators]
Show

 HP:0001156 Brachydactyly 
Show

 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
Show

 HP:0009803 Hypoplastic/small phalanges of the hand 
Show

 HP:0010049 Hypoplastic/short metacarpal bones 
Show

 HP:0010579 Cone-shaped epiphyses 
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr