ENSG00000153208


Homo sapiens

Features
Gene ID: ENSG00000153208
  
Biological name :MERTK
  
Synonyms : MER proto-oncogene, tyrosine kinase / MERTK / Q12866
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: 1
Band: q13
Gene start: 111898479
Gene end: 112029561
  
Corresponding Affymetrix probe sets: 206028_s_at (Human Genome U133 Plus 2.0 Array)   211912_at (Human Genome U133 Plus 2.0 Array)   211913_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000387277
Ensembl peptide - ENSP00000482824
Ensembl peptide - ENSP00000412660
Ensembl peptide - ENSP00000402129
Ensembl peptide - ENSP00000389152
Ensembl peptide - ENSP00000295408
NCBI entrez gene - 10461     See in Manteia.
OMIM - 604705
RefSeq - XM_017003165
RefSeq - XM_017003164
RefSeq - XM_005263565
RefSeq - XM_011510490
RefSeq - NM_006343
RefSeq - XM_005263568
RefSeq Peptide - NP_006334
swissprot - Q12866
swissprot - E9PHX8
swissprot - H7C3L9
swissprot - A0A087WZQ5
swissprot - E9PD22
Ensembl - ENSG00000153208
  
Related genetic diseases (OMIM): 613862 - Retinitis pigmentosa 38, 613862
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mertkaENSDARG00000074695Danio rerio
 MERTKENSGALG00000008257Gallus gallus
 MertkENSMUSG00000014361Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AXL / P30530 / AXL receptor tyrosine kinaseENSG0000016760137
TYRO3 / Q06418 / TYRO3 protein tyrosine kinaseENSG0000009244536
MET / P08581 / MET proto-oncogene, receptor tyrosine kinaseENSG0000010597622
TIE1 / P35590 / tyrosine kinase with immunoglobulin like and EGF like domains 1ENSG0000006605620
MST1R / Q04912 / macrophage stimulating 1 receptorENSG0000016407820
TEK / Q02763 / TEK receptor tyrosine kinaseENSG0000012015619
RYK / receptor-like tyrosine kinaseENSG0000016378516


Protein motifs (from Interpro)
Interpro ID Name
 IPR000719  Protein kinase domain
 IPR001245  Serine-threonine/tyrosine-protein kinase, catalytic domain
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR008266  Tyrosine-protein kinase, active site
 IPR011009  Protein kinase-like domain superfamily
 IPR013151  Immunoglobulin
 IPR013783  Immunoglobulin-like fold
 IPR017441  Protein kinase, ATP binding site
 IPR020635  Tyrosine-protein kinase, catalytic domain
 IPR036116  Fibronectin type III superfamily
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001779 natural killer cell differentiation IEA
 biological_processGO:0001818 negative regulation of cytokine production IEA
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0006909 phagocytosis IMP
 biological_processGO:0007166 cell surface receptor signaling pathway TAS
 biological_processGO:0007267 cell-cell signaling TAS
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0016310 phosphorylation IEA
 biological_processGO:0018108 peptidyl-tyrosine phosphorylation IEA
 biological_processGO:0030168 platelet activation IEA
 biological_processGO:0032940 secretion by cell IEA
 biological_processGO:0034446 substrate adhesion-dependent cell spreading IEA
 biological_processGO:0043277 apoptotic cell clearance IEA
 biological_processGO:0043491 protein kinase B signaling IEA
 biological_processGO:0050766 positive regulation of phagocytosis IDA
 biological_processGO:0050900 leukocyte migration TAS
 biological_processGO:0051250 negative regulation of lymphocyte activation IEA
 biological_processGO:0060041 retina development in camera-type eye IEA
 biological_processGO:0060068 vagina development IEA
 biological_processGO:0097350 neutrophil clearance IEA
 biological_processGO:2000107 negative regulation of leukocyte apoptotic process IMP
 cellular_componentGO:0001750 photoreceptor outer segment IEA
 cellular_componentGO:0005615 extracellular space IDA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016028 rhabdomere IDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0004713 protein tyrosine kinase activity IEA
 molecular_functionGO:0004714 transmembrane receptor protein tyrosine kinase activity TAS
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Cell surface interactions at the vascular wall


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000035 Abnormality of the testis 
Show

 HP:0000135 Hypogonadism "Reduced function of the gonads (testes in males or ovaries in females)." [HPO:curators]
Show

 HP:0000405 Hearing loss, conductive 
Show

 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
Show

 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
Show

 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
Show

 HP:0000501 Glaucoma "Glaucoma refers loss of retinal ganglion cells in a characteristic pattern of optic neuropathy usually associated with increased intraocular pressure." [HPO:curators]
Show

 HP:0000510 Retinitis pigmentosa "Hereditary degeneration and atrophy of the retina." [HPO:curators]
Show

 HP:0000512 Abnormal electroretinogram "Any abnormality of the electrical responses of various cell types in the retina as measured by electroretinography." [HPO:curators]
Show

 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
Show

 HP:0000529 Progressive visual loss 
Show

 HP:0000543 Pale optic disks 
Show

 HP:0000563 Keratoconus "A cone-shaped deformity of the cornea." [HPO:curators]
Show

 HP:0000602 Ophthalmoplegia 
Show

 HP:0000613 Photophobia "Excessive sensitivity to light with the sensation of discomfort or pain in the eyes due to exposure to bright light." [HPO:curators]
Show

 HP:0000618 Blindness 
Show

 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
Show

 HP:0000648 Optic atrophy 
Show

 HP:0000662 Night blindness 
Show

 HP:0000842 Hyperinsulinemia 
Show

 HP:0000987 Scarring 
Show

 HP:0001249 Mental retardation 
Show

 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
Show

 HP:0001513 Obesity "A status with BODY WEIGHT that is grossly above the acceptable or desirable weight, usually due to accumulation of excess FATS in the body. The standards may vary with age, sex, genetic or cultural background. In the BODY MASS INDEX, a BMI greater than 30.0 kg/m2 is considered obese, and a BMI greater than 40.0 kg/m2 is considered morbidly obese (MORBID OBESITY)." [MeSH:D009765]
Show

 HP:0005978 Noninsulin-dependent diabetes mellitus 
Show

 HP:0007401 Primary noninflammatory macular atrophy 
Show

 HP:0007675 Progressive night blindness 
Show

 HP:0007703 Abnormal retinal pigmentation 
Show

 HP:0008046 Abnormality of the retinal vasculature 
Show

 HP:0008736 Hypoplasia of penis 
Show

 HP:0200070 Peripheral retinal atrophy 
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000184500 PROS1 / P07225 / protein S  / reaction / complex
 ENSG00000183087 GAS6 / Q14393 / growth arrest specific 6  / complex / reaction






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr