ENSG00000167468


Homo sapiens

Features
Gene ID: ENSG00000167468
  
Biological name :GPX4
  
Synonyms : glutathione peroxidase 4 / GPX4 / P36969
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: 1
Band: p13.3
Gene start: 1103926
Gene end: 1106791
  
Corresponding Affymetrix probe sets: 201106_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000468349
Ensembl peptide - ENSP00000473614
Ensembl peptide - ENSP00000485000
Ensembl peptide - ENSP00000484697
Ensembl peptide - ENSP00000483655
Ensembl peptide - ENSP00000477503
Ensembl peptide - ENSP00000346103
Ensembl peptide - ENSP00000464989
Ensembl peptide - ENSP00000465828
Ensembl peptide - ENSP00000466872
Ensembl peptide - ENSP00000467900
NCBI entrez gene - 2879     See in Manteia.
OMIM - 138322
RefSeq - NM_002085
RefSeq - NM_001039847
RefSeq - NM_001039848
RefSeq Peptide - NP_001034936
RefSeq Peptide - NP_001034937
RefSeq Peptide - NP_002076
swissprot - K7ENB4
swissprot - K7ERP4
swissprot - P36969
swissprot - A0A0A0MTT1
swissprot - R4GNE4
swissprot - A0A087X2I2
swissprot - A0A087X247
swissprot - A0A087WT12
swissprot - K7EJ20
swissprot - K7EKX7
Ensembl - ENSG00000167468
  
Related genetic diseases (OMIM): 250220 - Spondylometaphyseal dysplasia, Sedaghatian type, 250220
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gpx4bENSDARG00000076836Danio rerio
 GPX4ENSGALG00000002595Gallus gallus
 Gpx4ENSMUSG00000075706Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GPX7 / Q96SL4 / glutathione peroxidase 7ENSG0000011615735
GPX1 / P07203 / glutathione peroxidase 1ENSG0000023327632
GPX8 / Q8TED1 / glutathione peroxidase 8 (putative)ENSG0000016429431
GPX3 / P22352 / glutathione peroxidase 3ENSG0000021144530
GPX5 / O75715 / glutathione peroxidase 5ENSG0000022458629
GPX2 / P18283 / glutathione peroxidase 2ENSG0000017615328
GPX6 / P59796 / glutathione peroxidase 6ENSG0000019870426


Protein motifs (from Interpro)
Interpro ID Name
 IPR000889  Glutathione peroxidase
 IPR029759  Glutathione peroxidase active site
 IPR029760  Glutathione peroxidase conserved site
 IPR036249  Thioredoxin-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006644 phospholipid metabolic process TAS
 biological_processGO:0006979 response to oxidative stress IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007283 spermatogenesis ISS
 biological_processGO:0019372 lipoxygenase pathway TAS
 biological_processGO:0051258 protein polymerization IMP
 biological_processGO:0055114 oxidation-reduction process IEA
 biological_processGO:0098869 cellular oxidant detoxification IEA
 biological_processGO:0110076 negative regulation of ferroptosis ISS
 cellular_componentGO:0005634 nucleus HDA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0032991 protein-containing complex IMP
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0004601 peroxidase activity IEA
 molecular_functionGO:0004602 glutathione peroxidase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0042802 identical protein binding IMP
 molecular_functionGO:0047066 phospholipid-hydroperoxide glutathione peroxidase activity ISS


Pathways (from Reactome)
Pathway description
Synthesis of 5-eicosatetraenoic acids
Synthesis of 12-eicosatetraenoic acid derivatives
Synthesis of 15-eicosatetraenoic acid derivatives


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000262 Turricephaly "Turricephaly is derived from the Latin word turris, meaning tall, and refers to a round, tall (tower-like) skull." [HPO:curators]
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 HP:0000358 Posteriorly rotated ears "A type of `abnormal location of the ears` (HP:0000357) in which the position of the ears is characterized by posterior rotation (the superior part of the ears is rotated towards the back of the head, and the inferior part of the ears towards the front)." [HPO:probinson]
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 HP:0000470 Short neck 
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 HP:0000772 Abnormality of the ribs 
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 HP:0000773 Short ribs 
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 HP:0000774 Narrow chest 
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 HP:0000782 Abnormality of the scapulae "Any abnormality of the scapulae (shoulder blades)." [HPO:curators]
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 HP:0000878 11 pairs of ribs 
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 HP:0000887 Cupped ribs 
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 HP:0000926 Platyspondyly 
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 HP:0001156 Brachydactyly 
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 HP:0001274 Agenesis of corpus callosum "Absence of the corpus callosum as a result of the failure of the corpus callosum to develop, which can be the result of a failure in any one of the multiple steps of callosal development including cellular proliferation and migration, axonal growth or glial patterning at the midline." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001302 Pachygyria "A congenital abnormality of the cerebral hemisphere chacterized by unusually thick gyrations (convolutions) of the cerebral cortex." [HPO:curators]
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 HP:0001321 Cerebellar hypoplasia 
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 HP:0001582 Loose, redundant skin 
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 HP:0001631 Atrial septal defect "Atrial septal defect (ASD) is a congenital heart defect that enables blood flow between the left and right atria via the interatrial septum. The three common types of ASD are sinus venosus defects, ostium secundum defects, and ostium primum defects." [HPO:curators]
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 HP:0001678 Atrioventricular block 
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 HP:0001762 Talipes equinovarus "Also called clubfoot typically has 4 main components: inversion and adduction of the forefoot; inversion of the heel and hindfoot; equinus (limitation of extension) of the ankle and subtalar joint; and internal rotation of the leg. Clubfoot is a complex, multifactorial deformity with genetic and intrauterine factors. One popular theory postulates that a clubfoot is a result of intrauterine maldevelopment of the talus that leads to adduction and plantarflexion of the foot. On radiographic projection a clubfoot can be noted as parallel axes of talus and calcaneus." [HPO:curators]
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 HP:0001831 Brachydactyly (feet) 
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 HP:0002132 Porencephaly 
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 HP:0002657 Spondylometaphyseal dysplasia 
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 HP:0002663 Late ossifying epiphyses 
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 HP:0002750 Delayed skeletal maturation "A decreased rate of skeletal maturation. Delayed skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
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 HP:0002869 Flared iliac wings 
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 HP:0003021 Metaphyseal cupping "Metaphyseal cupping refers to an inward bulging of the metaphyseal profile giving the metaphysis a cup-like appearance." [HPO:curators]
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 HP:0003025 Irregular metaphyses 
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 HP:0003026 Short long bones 
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 HP:0003085 Disproportionately long fibulae 
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 HP:0003180 Flat acetabular roofs 
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 HP:0003375 Narrow greater sacrosciatic notches "A narrowing of the sacrosciatic notch, i.e., the deep indentation in the posterior border of the hip bone at the point of union of the ilium and ischium." [HPO:curators]
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 HP:0004279 Hypoplastic hand 
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 HP:0004491 Large posterior fontanelle "An enlargement of the posterior fontanelle relative to age-dependent norms." [HPO:curators]
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 HP:0004688 Irregular tarsal bones 
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 HP:0004991 rhizomelic arm shortening 
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0005616 Accelerated skeletal maturation "An abnormally increased rate of skeletal maturation. Accelerated skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
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 HP:0005871 Metaphyseal chondrodysplasia 
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 HP:0006059 Cone-shaped metacarpal epiphyses "A cone-shaped appearance of the epiphyses of the metacarpal bones, producing a ball-in-a-socket appearance. This epiphyses are located at the distal ends of the metacarpal bones." [HPO:curators]
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 HP:0006543 Cardiorespiratory arrest 
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 HP:0007187 Focal lissencephaly 
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 HP:0008786 Irregular, lacy iliac crests "Lace-like irregularity of the iliac crest." [HPO:curators]
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 HP:0008798 Widened, small sacrosciatic notches 
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 HP:0008905 Rhizomelic short stature 
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 HP:0009381 Hypoplastic/small fingers 
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 HP:0009803 Hypoplastic/small phalanges of the hand 
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 HP:0010049 Hypoplastic/short metacarpal bones 
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 HP:0010230 Cone-shaped epiphyses of the phalanges of the hand "A cone-shaped appearance of the epiphyses of the fingers of the hand, producing a ball-in-a-socket appearance. The related entity angel-shaped epiphysis refers to a pronounced cone-shaped epiphysis in combination with a pseudoepiphysis at the distal end of a phalanx." [HPO:curators]
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 HP:0010579 Cone-shaped epiphyses 
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 HP:0011675 Arrhythmia "Any cardiac rhythm other than the normal sinus rhythm. Such a rhythm may be either of sinus or ectopic origin and either regular or irregular. An arrhythmia may be due to a disturbance in impulse formation or conduction or both." [DDD:dbrown, pmid:19063792]
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 HP:0012819 Myocarditis "Inflammation of the myocardium." [HPO:probinson, pmid:21304213, pmid:22185868, pmid:22361396]
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 HP:0031233 Horizontal inferior border of scapula "A morphological abnor,mality of the scapula in which there is a flat (horizontal) inferior edge of the scapula. The entire scapula is said to resemble a square, leading to the designation sqaring of the scapula (in Figure 1 of PMID:24706940 the scapulae have a roughly rectangular shape)." [PMID:24706940]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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