ENSG00000169427


Homo sapiens

Features
Gene ID: ENSG00000169427
  
Biological name :KCNK9
  
Synonyms : KCNK9 / potassium two pore domain channel subfamily K member 9 / Q9NPC2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: -1
Band: q24.3
Gene start: 139600838
Gene end: 139703056
  
Corresponding Affymetrix probe sets: 224072_s_at (Human Genome U133 Plus 2.0 Array)   238870_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000302166
Ensembl peptide - ENSP00000430676
Ensembl peptide - ENSP00000429847
NCBI entrez gene - 51305     See in Manteia.
OMIM - 605874
RefSeq - XM_011517101
RefSeq - NM_001282534
RefSeq - XM_011517102
RefSeq Peptide - NP_001269463
swissprot - Q9NPC2
swissprot - A0A024R9H3
Ensembl - ENSG00000169427
  
Related genetic diseases (OMIM): 612292 - Birk-Barel mental retardation dysmorphism syndrome, 612292
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 kcnk9ENSDARG00000104563Danio rerio
 KCNK9ENSGALG00000037285Gallus gallus
 Kcnk9ENSMUSG00000036760Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KCNK3 / O14649 / potassium two pore domain channel subfamily K member 3ENSG0000017130362
KCNK15 / Q9H427 / potassium two pore domain channel subfamily K member 15ENSG0000012424949
KCNK4 / Q9NYG8 / potassium two pore domain channel subfamily K member 4ENSG0000018245024
KCNK10 / P57789 / potassium two pore domain channel subfamily K member 10ENSG0000010043324
KCNK1 / O00180 / potassium two pore domain channel subfamily K member 1ENSG0000013575022
KCNK2 / O95069 / potassium two pore domain channel subfamily K member 2ENSG0000008248222
KCNK5 / O95279 / potassium two pore domain channel subfamily K member 5ENSG0000016462621
KCNK16 / Q96T55 / potassium two pore domain channel subfamily K member 16ENSG0000009598121
KCNK6 / Q9Y257 / potassium two pore domain channel subfamily K member 6ENSG0000009933720
KCNK17 / Q96T54 / potassium two pore domain channel subfamily K member 17ENSG0000012478019
KCNK7 / Q9Y2U2 / potassium two pore domain channel subfamily K member 7ENSG0000017333818


Protein motifs (from Interpro)
Interpro ID Name
 IPR003092  Two pore domain potassium channel, TASK family
 IPR003280  Two pore domain potassium channel
 IPR005407  Potassium channel subfamily K member 9
 IPR013099  Potassium channel domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006813 potassium ion transport NAS
 biological_processGO:0030322 stabilization of membrane potential IBA
 biological_processGO:0071804 cellular potassium ion transport IEA
 biological_processGO:0071805 potassium ion transmembrane transport IBA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0008021 synaptic vesicle IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005249 voltage-gated potassium channel activity IEA
 molecular_functionGO:0005267 potassium channel activity TAS
 molecular_functionGO:0022841 potassium ion leak channel activity IBA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
TWIK-releated acid-sensitive K+ channel (TASK)
Phase 4 - resting membrane potential


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
Show

 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
Show

 HP:0000322 Short philtrum 
Show

 HP:0000341 Narrow forehead "An abnormally reduced side-to-side width of the forehead." [HPO:curators]
Show

 HP:0000574 Thick eyebrows 
Show

 HP:0000960 Sacral dimple "A subtype of `skin dimples` (HP:0010781) presenting as an indentation in the skin of the intergluteal cleft ." [HPO:probinson]
Show

 HP:0001249 Mental retardation 
Show

 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
Show

 HP:0001999 Facial dysmorphism 
Show

 HP:0002015 Dysphagia "Difficulty in swallowing." [HPO:curators]
Show

 HP:0002553 Arched eyebrows 
Show

 HP:0008872 Feeding problems in infancy 
Show

 HP:0011229 Broad eyebrow "Regional increase in the width (height) of the eyebrow." [pmid:19125427]
Show

 HP:0011819 Submucous cleft soft palate "A cleft of the muscular (soft) portion of the palate that is covered by mucous membrane. Soft-palate submucous clefts are characterized by a midline deficiency or lack of muscle tissue." [HPO:probinson]
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000169427 KCNK9 / Q9NPC2 / potassium two pore domain channel subfamily K member 9  / complex
 ENSG00000171303 KCNK3 / O14649 / potassium two pore domain channel subfamily K member 3  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr