ENSG00000178919


Homo sapiens

Features
Gene ID: ENSG00000178919
  
Biological name :FOXE1
  
Synonyms : forkhead box E1 / FOXE1 / O00358
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: 1
Band: q22.33
Gene start: 97853254
Gene end: 97856715
  
Corresponding Affymetrix probe sets: 206912_at (Human Genome U133 Plus 2.0 Array)   208239_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000364265
NCBI entrez gene - 2304     See in Manteia.
OMIM - 602617
RefSeq - NM_004473
RefSeq Peptide - NP_004464
swissprot - O00358
Ensembl - ENSG00000178919
  
Related genetic diseases (OMIM): 241850 - Bamforth-Lazarus syndrome, 241850
  616534 - {Thyroid cancer, nonmedullary, 4}, 616534

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 foxe1ENSDARG00000079266Danio rerio
 foxe3ENSDARG00000062892Danio rerio
 FOXE1ENSGALG00000026252Gallus gallus
 Foxe1ENSMUSG00000070990Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FOXE3 / Q13461 / forkhead box E3ENSG0000018679041
FOXD1 / Q16676 / forkhead box D1ENSG0000025149332
FOXD2 / O60548 / forkhead box D2ENSG0000018656432
FOXD4 / Q12950 / forkhead box D4ENSG0000017012229
Q5VV16 / FOXD4L5 / forkhead box D4 like 5ENSG0000020477928
Q8WXT5 / FOXD4L4 / forkhead box D4 like 4ENSG0000018465928
Q3SYB3 / FOXD4L6 / forkhead box D4 like 6ENSG0000027351428
Q6VB84 / FOXD4L3 / forkhead box D4 like 3ENSG0000018755928
FOXD3 / Q9UJU5 / forkhead box D3ENSG0000018714028
Q9NU39 / FOXD4L1 / forkhead box D4 like 1ENSG0000018449227
FOXG1 / P55316 / forkhead box G1ENSG0000017616525
FOXF2 / Q12947 / forkhead box F2ENSG0000013727325
FOXQ1 / Q9C009 / forkhead box Q1ENSG0000016437924
FOXF1 / Q12946 / forkhead box F1ENSG0000010324121
AC187653.1ENSG0000024876721
FOXH1 / O75593 / forkhead box H1ENSG0000016097320
FOXP4 / Q8IVH2 / forkhead box P4ENSG0000013716617
FOXP1 / Q9H334 / forkhead box P1ENSG0000011486116
FOXP2 / O15409 / forkhead box P2ENSG0000012857314
FOXP3 / Q9BZS1 / forkhead box P3ENSG0000004976812


Protein motifs (from Interpro)
Interpro ID Name
 IPR001766  Fork head domain
 IPR018122  Fork head domain conserved site1
 IPR030456  Fork head domain conserved site 2
 IPR036388  Winged helix-like DNA-binding domain superfamily
 IPR036390  Winged helix DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IMP
 biological_processGO:0006590 thyroid hormone generation IEA
 biological_processGO:0009653 anatomical structure morphogenesis NAS
 biological_processGO:0016477 cell migration IEA
 biological_processGO:0030154 cell differentiation IBA
 biological_processGO:0030878 thyroid gland development IMP
 biological_processGO:0031069 hair follicle morphogenesis IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated ISS
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IDA
 biological_processGO:0048538 thymus development IEP
 biological_processGO:0048562 embryonic organ morphogenesis IEA
 biological_processGO:0060021 roof of mouth development IEA
 biological_processGO:0060022 hard palate development IMP
 biological_processGO:0060023 soft palate development IMP
 biological_processGO:0060465 pharynx development IEP
 biological_processGO:1904888 cranial skeletal system development IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IMP
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IDA
 molecular_functionGO:0043565 sequence-specific DNA binding IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000158 Macroglossia "Increased length and width of the tongue." [pmid:19125428]
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 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
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 HP:0000239 Large fontanelles "In newborns, the two frontal bones, two parietal bones, and one occipital bone are joined by fibrous sutures, which form a small posterior fontanelle, and a larger, diamond-shaped anterior fontanelle. These regions allow for the skull to pass the birth canal and for later growth. The fontanelles gradually ossify, whereby the posterior fontanelle usually closes by eight weeks and the anterior fontanelle by the 9th to 16th month of age. Large fontanelles are diagnosed if the fontanelles are larger than age-dependent norms." [HPO:curators]
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 HP:0000278 Retrognathia 
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 HP:0000280 Coarse facial features 
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 HP:0000453 Choanal atresia "Absence or abnormal closure of the choana (the posterior nasal aperture)." [HPO:curators]
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 HP:0000821 Hypothyroidism 
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 HP:0000851 Congenital hypothyroidism 
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 HP:0001249 Mental retardation 
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001324 Muscle weakness "Reduced strength of muscles." [HPO:curators]
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 HP:0001561 Polyhydramnios 
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 HP:0002019 Constipation 
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 HP:0002176 Spinal cord compression 
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 HP:0002653 Bone pain 
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 HP:0002730 Chronic noninfectious lymphadenopathy 
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 HP:0002757 Recurrent fractures "The repeated occurence of bone fractures (implying an abnormally increased tendency for fracture)." [HPO:curators]
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 HP:0002895 Papillary thyroid carcinoma 
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 HP:0003003 Colon cancer 
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 HP:0003270 Abdominal distention "Enlargement or distention of the abdomen, which can be a secondary feature associated with a number of conditions such as bowel obstruction." [HPO:curators]
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0005994 Nodular goiter 
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 HP:0006528 Chronic lung disease 
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 HP:0006731 Follicular thyroid carcinoma 
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 HP:0006766 Papillary renal cell carcinoma 
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 HP:0008191 Athyroidal hypothyroidism 
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 HP:0010564 Bifid epiglottis "A midline anterior-posterior cleft of the epiglottis that involves at least two-thirds of the epiglottic leaf. It is a useful feature for clinical diagnosis because it appears to be very rare in syndromes other than Pallister-Hall-Syndrome and is also rare as an isolated malformation." [HPO:curators]
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 HP:0010864 Mental retardation, severe "Moderate mental retardation is defined as an intelligence quotient (IQ) in the range of 20-34." [HPO:probinson]
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 HP:0011362 Abnormal hair quantity "An abnormal amount of hair." [DDD:cmoss]
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0012288 Neoplasm of head and neck "A neoplasm of the head and neck region with origin in the lip, oral cavity, nasal cavity, paranasal sinuses, pharynx, and larynx." [HPO:probinson]
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 HP:0012378 Fatigue "A subjective feeling of tiredness characterized by a lack of energy and motivation." [HPO:probinson]
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 HP:0100786 Hypersomnia 
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 HP:3000037 Abnormality of neck blood vessel "An abnormality of a blood vessel of the neck, including branches of the arterial and venous systems of the neck." [GOC:TermGenie, orcid.org/0000-0001-5889-4463]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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