ENSG00000185245


Homo sapiens

Features
Gene ID: ENSG00000185245
  
Biological name :GP1BA
  
Synonyms : glycoprotein Ib platelet alpha subunit / GP1BA / P07359
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: 1
Band: p13.2
Gene start: 4932297
Gene end: 4935030
  
Corresponding Affymetrix probe sets: 207389_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000329380
Ensembl peptide - ENSP00000484439
NCBI entrez gene - 2811     See in Manteia.
OMIM - 606672
RefSeq - NM_000173
RefSeq Peptide - NP_000164
swissprot - A0A0C4DGZ8
swissprot - P07359
Ensembl - ENSG00000185245
  
Related genetic diseases (OMIM): 153670 - Bernard-Soulier syndrome, type A2 (dominant), 153670
  177820 - von Willebrand disease, platelet-type, 177820
  231200 - Bernard-Soulier syndrome, type A1 (recessive), 231200
  258660 - {Nonarteritic anterior ischemic optic neuropathy, susceptibility to}, 258660
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Gp1baENSMUSG00000050675Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FLRT3 / Q9NZU0 / fibronectin leucine rich transmembrane protein 3ENSG0000012584818
FLRT1 / Q9NZU1 / fibronectin leucine rich transmembrane protein 1ENSG0000012650018
FLRT2 / O43155 / fibronectin leucine rich transmembrane protein 2ENSG0000018507017
LRG1 / P02750 / leucine rich alpha-2-glycoprotein 1ENSG0000017123614
OMG / P23515 / oligodendrocyte myelin glycoproteinENSG0000012686111


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000902 cell morphogenesis IEA
 biological_processGO:0006469 negative regulation of protein kinase activity IBA
 biological_processGO:0007155 cell adhesion IDA
 biological_processGO:0007166 cell surface receptor signaling pathway TAS
 biological_processGO:0007596 blood coagulation IMP
 biological_processGO:0007597 blood coagulation, intrinsic pathway TAS
 biological_processGO:0007599 hemostasis IEA
 biological_processGO:0019221 cytokine-mediated signaling pathway IBA
 biological_processGO:0030168 platelet activation TAS
 biological_processGO:0030193 regulation of blood coagulation TAS
 biological_processGO:0042730 fibrinolysis IDA
 biological_processGO:0045652 regulation of megakaryocyte differentiation TAS
 biological_processGO:0046426 negative regulation of JAK-STAT cascade IBA
 biological_processGO:0070493 thrombin-activated receptor signaling pathway IEA
 biological_processGO:0070527 platelet aggregation IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0009986 cell surface HDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031362 anchored component of external side of plasma membrane IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0004860 protein kinase inhibitor activity IBA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0015057 thrombin-activated receptor activity TAS


Pathways (from Reactome)
Pathway description
Intrinsic Pathway of Fibrin Clot Formation
GP1b-IX-V activation signalling
Platelet Adhesion to exposed collagen
Platelet Aggregation (Plug Formation)
RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000132 Menorrhagia 
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 HP:0000225 Gingival bleeding 
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 HP:0000421 Epistaxis 
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 HP:0000967 Petechiae 
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 HP:0000978 Ecchymoses 
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 HP:0000979 Purpura 
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 HP:0001438 Abnormality of the abdomen "Abnormality of the abdomen ("belly"), that is, the part of the body between the pelvis and the thorax." [HPO:curators]
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 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
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 HP:0001873 Thrombocytopenia 
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 HP:0001878 Hemolytic anemia 
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 HP:0001892 Bleeding diathesis "An abnormal susceptibility to bleeding because of a defect in coagulation." [HPO:curators]
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 HP:0003010 Prolonged bleeding time 
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 HP:0004446 Stomatocytosis 
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 HP:0004854 intermittent thrombocytopenia 
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 HP:0006298 Prolonged bleeding after dental extraction 
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 HP:0011877 Increased mean platelet volume "Average platelet volume above the upper limit of the normal reference interval." [DDD:wouwehand]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000131187 F12 / P00748 / coagulation factor XII  / reaction
 ENSG00000180210 F2 / P00734 / coagulation factor II, thrombin  / reaction / complex
 ENSG00000145675 P27986 / PIK3R1 / phosphoinositide-3-kinase regulatory subunit 1  / complex / reaction
 ENSG00000088926 F11 / P03951 / coagulation factor XI  / complex / reaction
 ENSG00000164924 YWHAZ / P63104 / tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta  / reaction / complex
 ENSG00000196924 FLNA / P21333 / filamin A  / complex / reaction
 ENSG00000110799 VWF / P04275 / von Willebrand factor  / reaction / complex
 ENSG00000185245 GP1BA / P07359 / glycoprotein Ib platelet alpha subunit  / complex
 ENSG00000169704 GP9 / P14770 / glycoprotein IX platelet  / complex
 ENSG00000101981 F9 / P00740 / coagulation factor IX  / reaction
 ENSG00000203618 GP1BB / P13224 / glycoprotein Ib platelet beta subunit  / complex
 ENSG00000178732 GP5 / P40197 / glycoprotein V platelet  / complex






 

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