ENSG00000101981


Homo sapiens

Features
Gene ID: ENSG00000101981
  
Biological name :F9
  
Synonyms : coagulation factor IX / F9 / P00740
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: 1
Band: q27.1
Gene start: 139530758
Gene end: 139563458
  
Corresponding Affymetrix probe sets: 207218_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000218099
Ensembl peptide - ENSP00000377650
NCBI entrez gene - 2158     See in Manteia.
OMIM - 300746
RefSeq - XM_005262397
RefSeq - NM_000133
RefSeq - NM_001313913
RefSeq Peptide - NP_001300842
RefSeq Peptide - NP_000124
swissprot - P00740
Ensembl - ENSG00000101981
  
Related genetic diseases (OMIM): 122700 - {Warfarin sensitivity}, 122700
  300807 - Thrombophilia, X-linked, due to factor IX defect, 300807
  306900 - Hemophilia B, 306900
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 f9aENSDARG00000010097Danio rerio
 f9bENSDARG00000029493Danio rerio
 F9ENSGALG00000006513Gallus gallus
 F9ENSMUSG00000031138Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
F10 / P00742 / coagulation factor XENSG0000012621844
F7 / P08709 / coagulation factor VIIENSG0000005759339
PROC / P04070 / protein C, inactivator of coagulation factors Va and VIIIaENSG0000011571834
MASP1 / P48740 / mannan binding lectin serine peptidase 1ENSG0000012724131
PROZ / P22891 / protein Z, vitamin K dependent plasma glycoproteinENSG0000012623129
C1R / P00736 / complement C1rENSG0000015940329
MASP2 / O00187 / mannan binding lectin serine peptidase 2ENSG0000000972428
C1S / P09871 / complement C1sENSG0000018232627
PAMR1 / Q6UXH9 / peptidase domain containing associated with muscle regeneration 1ENSG0000014909023
C1RL / Q9NZP8 / complement C1r subcomponent likeENSG0000013917822
HP / P00738 / haptoglobinENSG0000025701717
HPR / P00739 / haptoglobin-related proteinENSG0000026170116


Protein motifs (from Interpro)
Interpro ID Name
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000294  Gamma-carboxyglutamic acid-rich (GLA) domain
 IPR000742  EGF-like domain
 IPR001254  Serine proteases, trypsin domain
 IPR001314  Peptidase S1A, chymotrypsin family
 IPR001881  EGF-like calcium-binding domain
 IPR009003  Peptidase S1, PA clan
 IPR012224  Peptidase S1A, coagulation factor VII/IX/X/C/Z
 IPR013032  EGF-like, conserved site
 IPR017857  Coagulation factor-like, Gla domain superfamily
 IPR018097  EGF-like calcium-binding, conserved site
 IPR018114  Serine proteases, trypsin family, histidine active site
 IPR033116  Serine proteases, trypsin family, serine active site
 IPR035694  Coagulation factor IX
 IPR035972  Gamma-carboxyglutamic acid-rich (GLA) domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006465 signal peptide processing TAS
 biological_processGO:0006508 proteolysis IDA
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport TAS
 biological_processGO:0007596 blood coagulation IMP
 biological_processGO:0007597 blood coagulation, intrinsic pathway TAS
 biological_processGO:0007598 blood coagulation, extrinsic pathway TAS
 biological_processGO:0007599 hemostasis IEA
 biological_processGO:0017187 peptidyl-glutamic acid carboxylation TAS
 biological_processGO:0031638 zymogen activation IDA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005615 extracellular space IDA
 cellular_componentGO:0005788 endoplasmic reticulum lumen TAS
 cellular_componentGO:0005796 Golgi lumen TAS
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0004175 endopeptidase activity IDA
 molecular_functionGO:0004252 serine-type endopeptidase activity NAS
 molecular_functionGO:0005509 calcium ion binding IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008236 serine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Extrinsic Pathway of Fibrin Clot Formation
Intrinsic Pathway of Fibrin Clot Formation
Gamma-carboxylation of protein precursors
Transport of gamma-carboxylated protein precursors from the endoplasmic reticulum to the Golgi apparatus
Removal of aminoterminal propeptides from gamma-carboxylated proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0001417 X-linked inheritance "A mode of inheritance that is observed for traits related to a gene encoded on the X chromosome." [HPO:curators]
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 HP:0001419 X-linked recessive inheritance "A mode of inheritance that is observed for recessive traits related to a gene encoded on the X chromosome. In the context of medical genetics, X-linked recessive disorders manifest in males (who have one copy of the X chromosome and are thus hemizygotes), but generally not in female heterozygotes who have one mutant and one normal allele." [HPO:curators]
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 HP:0001892 Bleeding diathesis "An abnormal susceptibility to bleeding because of a defect in coagulation." [HPO:curators]
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 HP:0001934 Persistent bleeding after trauma 
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 HP:0002239 Gastrointestinal hemorrhage 
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 HP:0002625 Deep venous thrombosis 
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 HP:0002758 Osteoarthritis 
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 HP:0003645 Prolonged partial thromboplastin time 
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 HP:0005261 Joint hemorrhage 
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 HP:0005542 Whole-blood clotting time prolonged 
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 HP:0010989 Abnormality of the intrinsic pathway "An abnormality of the `intrinsic pathway` (GO:0007597) (also known as the contact activation pathway) of the coagulation cascade." [HPO:probinson]
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 HP:0011858 Reduced factor IX activity "Decreased activity of `coagulation factor IX` (PR:000007303). Factor IX, which itself is activated by factor Xa or factor VIIa to form factor IXa, activates factor X into factor Xa." [HPO:probinson]
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 HP:0100724 Hypercoagulability 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000185010 F8 / P00451 / coagulation factor VIII  / complex / reaction
 ENSG00000101981 F9 / P00740 / coagulation factor IX  / complex
 ENSG00000126218 F10 / P00742 / coagulation factor X  / reaction
 ENSG00000115486 GGCX / P38435 / gamma-glutamyl carboxylase  / reaction
 ENSG00000088926 F11 / P03951 / coagulation factor XI  / reaction
 ENSG00000140564 FURIN / P09958 / furin, paired basic amino acid cleaving enzyme  / reaction
 ENSG00000169704 GP9 / P14770 / glycoprotein IX platelet  / reaction
 ENSG00000185245 GP1BA / P07359 / glycoprotein Ib platelet alpha subunit  / reaction
 ENSG00000117525 F3 / P13726 / coagulation factor III, tissue factor  / reaction
 ENSG00000057593 F7 / P08709 / coagulation factor VII  / reaction
 ENSG00000203618 GP1BB / P13224 / glycoprotein Ib platelet beta subunit  / reaction
 ENSG00000178732 GP5 / P40197 / glycoprotein V platelet  / reaction






 

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