ENSG00000057593


Homo sapiens

Features
Gene ID: ENSG00000057593
  
Biological name :F7
  
Synonyms : coagulation factor VII / F7 / P08709
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 13
Strand: 1
Band: q34
Gene start: 113105788
Gene end: 113120681
  
Corresponding Affymetrix probe sets: 207300_s_at (Human Genome U133 Plus 2.0 Array)   237414_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000442051
Ensembl peptide - ENSP00000329546
Ensembl peptide - ENSP00000364731
Ensembl peptide - ENSP00000387669
NCBI entrez gene - 2155     See in Manteia.
OMIM - 613878
RefSeq - XM_011537475
RefSeq - NM_000131
RefSeq - NM_001267554
RefSeq - NM_019616
RefSeq - XM_006719963
RefSeq - XM_011537474
RefSeq Peptide - NP_001254483
RefSeq Peptide - NP_062562
RefSeq Peptide - NP_000122
swissprot - F5H8B0
swissprot - P08709
swissprot - E9PH36
Ensembl - ENSG00000057593
  
Related genetic diseases (OMIM): 227500 - Factor VII deficiency, 227500
  608446 - {Myocardial infarction, decreased susceptibility to}, 608446
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 f7ENSDARG00000034862Danio rerio
 f7iENSDARG00000075827Danio rerio
 zgc:163025ENSDARG00000100782Danio rerio
 F7ENSGALG00000016833Gallus gallus
 F7ENSMUSG00000031443Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
F10 / P00742 / coagulation factor XENSG0000012621840
F9 / P00740 / coagulation factor IXENSG0000010198139
PROC / P04070 / protein C, inactivator of coagulation factors Va and VIIIaENSG0000011571838
PROZ / P22891 / protein Z, vitamin K dependent plasma glycoproteinENSG0000012623127
C1R / P00736 / complement C1rENSG0000015940327
MASP2 / O00187 / mannan binding lectin serine peptidase 2ENSG0000000972427
C1S / P09871 / complement C1sENSG0000018232626
MASP1 / P48740 / mannan binding lectin serine peptidase 1ENSG0000012724126
PAMR1 / Q6UXH9 / peptidase domain containing associated with muscle regeneration 1ENSG0000014909023
C1RL / Q9NZP8 / complement C1r subcomponent likeENSG0000013917819
HP / P00738 / haptoglobinENSG0000025701717
HPR / P00739 / haptoglobin-related proteinENSG0000026170117


Protein motifs (from Interpro)
Interpro ID Name
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000294  Gamma-carboxyglutamic acid-rich (GLA) domain
 IPR000742  EGF-like domain
 IPR001254  Serine proteases, trypsin domain
 IPR001314  Peptidase S1A, chymotrypsin family
 IPR001881  EGF-like calcium-binding domain
 IPR009003  Peptidase S1, PA clan
 IPR012224  Peptidase S1A, coagulation factor VII/IX/X/C/Z
 IPR013032  EGF-like, conserved site
 IPR017857  Coagulation factor-like, Gla domain superfamily
 IPR018097  EGF-like calcium-binding, conserved site
 IPR018114  Serine proteases, trypsin family, histidine active site
 IPR033116  Serine proteases, trypsin family, serine active site
 IPR033190  Coagulation factor VII
 IPR035972  Gamma-carboxyglutamic acid-rich (GLA) domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001666 response to hypoxia IEA
 biological_processGO:0002690 positive regulation of leukocyte chemotaxis IDA
 biological_processGO:0006465 signal peptide processing TAS
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport TAS
 biological_processGO:0007596 blood coagulation IEA
 biological_processGO:0007598 blood coagulation, extrinsic pathway TAS
 biological_processGO:0007599 hemostasis IEA
 biological_processGO:0007623 circadian rhythm IEA
 biological_processGO:0009725 response to hormone IEA
 biological_processGO:0010037 response to carbon dioxide IEA
 biological_processGO:0010641 positive regulation of platelet-derived growth factor receptor signaling pathway IDA
 biological_processGO:0014070 response to organic cyclic compound IEA
 biological_processGO:0016485 protein processing IDA
 biological_processGO:0017187 peptidyl-glutamic acid carboxylation TAS
 biological_processGO:0030194 positive regulation of blood coagulation IEA
 biological_processGO:0030335 positive regulation of cell migration TAS
 biological_processGO:0031100 animal organ regeneration IEA
 biological_processGO:0031667 response to nutrient levels IEA
 biological_processGO:0032355 response to estradiol IEA
 biological_processGO:0032571 response to vitamin K IEA
 biological_processGO:0033595 response to genistein IEA
 biological_processGO:0043627 response to estrogen IEA
 biological_processGO:0050927 positive regulation of positive chemotaxis IDA
 biological_processGO:0051897 positive regulation of protein kinase B signaling IDA
 biological_processGO:0060416 response to growth hormone IEA
 biological_processGO:0061476 response to anticoagulant IEA
 biological_processGO:0070723 response to cholesterol IEA
 biological_processGO:0097066 response to thyroid hormone IEA
 biological_processGO:0097068 response to thyroxine IEA
 biological_processGO:1904400 response to Thyroid stimulating hormone IEA
 biological_processGO:1904612 response to 2,3,7,8-tetrachlorodibenzodioxine IEA
 biological_processGO:1905217 response to astaxanthin IEA
 biological_processGO:1905225 response to thyrotropin-releasing hormone IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005788 endoplasmic reticulum lumen TAS
 cellular_componentGO:0005796 Golgi lumen TAS
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0031982 vesicle IEA
 cellular_componentGO:1905286 serine-type peptidase complex IPI
 molecular_functionGO:0004175 endopeptidase activity IEA
 molecular_functionGO:0004252 serine-type endopeptidase activity IEA
 molecular_functionGO:0005102 signaling receptor binding IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008236 serine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
BMAL1:CLOCK,NPAS2 activates circadian gene expression
Extrinsic Pathway of Fibrin Clot Formation
Gamma-carboxylation of protein precursors
Transport of gamma-carboxylated protein precursors from the endoplasmic reticulum to the Golgi apparatus
Removal of aminoterminal propeptides from gamma-carboxylated proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000132 Menorrhagia 
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 HP:0000138 Ovarian cysts 
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 HP:0000225 Gingival bleeding 
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 HP:0000421 Epistaxis 
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 HP:0000978 Ecchymoses 
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 HP:0001892 Bleeding diathesis "An abnormal susceptibility to bleeding because of a defect in coagulation." [HPO:curators]
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 HP:0002170 Intracranial hemorrhage "A hemorrhage (bleeding) occuring within the skull." [HPO:curators]
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 HP:0002239 Gastrointestinal hemorrhage 
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 HP:0003828 Variable expressivity 
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 HP:0004846 severe protracted bleeding after surgery 
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 HP:0005261 Joint hemorrhage 
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 HP:0008151 Prolonged prothrombin and partial thromboplastin times 
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 HP:0008169 Factor VII deficiency 
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 HP:0010881 Abnormality of the umbilical cord "An abnormality of the umbilical cord, which is the cord connecting the developing embryo or fetus to the placenta." [HPO:probinson]
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 HP:0011891 Post-partum hemorrhage "Significant maternal haemorrhage/blood loss following deilvery of a child." [DDD:akelly]
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 HP:0012233 Intramuscular hematoma "Blood clot formed within muscle tissue following leakage of blood into the tissue." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000115486 GGCX / P38435 / gamma-glutamyl carboxylase  / reaction
 ENSG00000003436 TFPI / P10646 / tissue factor pathway inhibitor  / complex / reaction
 ENSG00000140564 FURIN / P09958 / furin, paired basic amino acid cleaving enzyme  / reaction
 ENSG00000117525 F3 / P13726 / coagulation factor III, tissue factor  / reaction / complex
 ENSG00000126218 F10 / P00742 / coagulation factor X  / reaction / complex
 ENSG00000057593 F7 / P08709 / coagulation factor VII  / complex
 ENSG00000101981 F9 / P00740 / coagulation factor IX  / reaction






 

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