ENSG00000182326


Homo sapiens

Features
Gene ID: ENSG00000182326
  
Biological name :C1S
  
Synonyms : C1S / complement C1s / P09871
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: 1
Band: p13.31
Gene start: 6988259
Gene end: 7071032
  
Corresponding Affymetrix probe sets: 1555229_a_at (Human Genome U133 Plus 2.0 Array)   208747_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000385035
Ensembl peptide - ENSP00000397921
Ensembl peptide - ENSP00000484657
Ensembl peptide - ENSP00000442298
Ensembl peptide - ENSP00000406643
Ensembl peptide - ENSP00000399892
Ensembl peptide - ENSP00000328173
Ensembl peptide - ENSP00000354057
Ensembl peptide - ENSP00000384171
Ensembl peptide - ENSP00000384464
NCBI entrez gene - 716     See in Manteia.
OMIM - 120580
RefSeq - XM_005253760
RefSeq - NM_001346850
RefSeq - NM_001734
RefSeq - NM_201442
RefSeq Peptide - NP_958850
RefSeq Peptide - NP_001333779
RefSeq Peptide - NP_001725
swissprot - P09871
swissprot - C9JY52
swissprot - C9IZP8
swissprot - B5MCV4
swissprot - F5H7T4
swissprot - A0A087X232
swissprot - F8WCZ6
swissprot - H0Y5D1
Ensembl - ENSG00000182326
  
Related genetic diseases (OMIM): 613783 - C1s deficiency, 613783
  617174 - Ehlers-Danlos syndrome, periodontal type, 2, 617174
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 c1rENSDARG00000100248Danio rerio
 wu:fd46c06ENSDARG00000102094Danio rerio
 C1SENSGALG00000014603Gallus gallus
 C1s1ENSMUSG00000038521Mus musculus
 C1s2ENSMUSG00000079343Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MASP1 / P48740 / mannan binding lectin serine peptidase 1ENSG0000012724139
C1R / P00736 / complement C1rENSG0000015940339
MASP2 / O00187 / mannan binding lectin serine peptidase 2ENSG0000000972438
C1RL / Q9NZP8 / complement C1r subcomponent likeENSG0000013917821
PAMR1 / Q6UXH9 / peptidase domain containing associated with muscle regeneration 1ENSG0000014909019
F9 / P00740 / coagulation factor IXENSG0000010198118
HP / P00738 / haptoglobinENSG0000025701718
F7 / P08709 / coagulation factor VIIENSG0000005759318
F10 / P00742 / coagulation factor XENSG0000012621817
PROC / P04070 / protein C, inactivator of coagulation factors Va and VIIIaENSG0000011571817
HPR / P00739 / haptoglobin-related proteinENSG0000026170116
PROZ / P22891 / protein Z, vitamin K dependent plasma glycoproteinENSG0000012623113


Protein motifs (from Interpro)
Interpro ID Name
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000436  Sushi/SCR/CCP domain
 IPR000859  CUB domain
 IPR001254  Serine proteases, trypsin domain
 IPR001314  Peptidase S1A, chymotrypsin family
 IPR001881  EGF-like calcium-binding domain
 IPR009003  Peptidase S1, PA clan
 IPR018097  EGF-like calcium-binding, conserved site
 IPR033116  Serine proteases, trypsin family, serine active site
 IPR035708  Complement C1s subcomponent
 IPR035914  Spermadhesin, CUB domain superfamily
 IPR035976  Sushi/SCR/CCP superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001867 complement activation, lectin pathway IBA
 biological_processGO:0002376 immune system process IEA
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0006956 complement activation TAS
 biological_processGO:0006958 complement activation, classical pathway IEA
 biological_processGO:0030449 regulation of complement activation TAS
 biological_processGO:0045087 innate immune response IEA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0070062 extracellular exosome HDA
 cellular_componentGO:0072562 blood microparticle HDA
 molecular_functionGO:0004252 serine-type endopeptidase activity IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008236 serine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Initial triggering of complement
Classical antibody-mediated complement activation
Regulation of Complement cascade


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000212 Gingival hyperplasia 
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 HP:0000225 Gingival bleeding 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000691 Microdontia 
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 HP:0000704 Periodontal disease 
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 HP:0000872 Hashimoto thyroiditis 
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 HP:0000974 Hyperextensible skin 
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 HP:0000978 Ecchymoses 
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 HP:0001030 Fragile skin 
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 HP:0001034 Hyperpigmented macules 
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 HP:0001075 Atrophic scars 
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 HP:0001382 Joint hypermobility "The ability of a joint to move beyond its normal range of motion." [HPO:curators]
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002664 Neoplasia "An organ or organ-system abnormality that consists of uncontrolled autonomous cell-proliferation which can occur in any part of the body as a benign or malignant tumour or neoplasm." [HPO:curators]
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 HP:0002725 Systemic lupus erythematosus 
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 HP:0002829 Arthralgia 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0005339 Abnormality of complement 
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 HP:0005692 Joint hyperflexibility 
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 HP:0006308 Atrophy of alveolar ridges 
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 HP:0006323 Premature deciduous tooth loss 
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 HP:0006349 Absence of permanent teeth "A congenital defect characterized by the absence of one or more permanent teeth, including oligodontia, hypodonita, and adontia of the permanent dentition." [HPO:probinson]
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 HP:0012115 Hepatitis "Inflammation of the liver." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000149131 P05155 / SERPING1 / serpin family G member 1  / reaction / complex
 ENSG00000211893 IGHG2 / P01859 / immunoglobulin heavy constant gamma 2 (G2m marker)  / complex
 ENSG00000173372 C1QA / P02745 / complement C1q A chain  / complex
 ENSG00000159403 C1R / P00736 / complement C1r  / complex
 ENSG00000211892 IGHG4 / P01861 / immunoglobulin heavy constant gamma 4 (G4m marker)  / complex
 ENSG00000173369 C1QB / P02746 / complement C1q B chain  / complex
 ENSG00000166278 C2 / P06681 / complement C2  / reaction
 ENSG00000244731 C4A / P0C0L4 / complement C4A (Rodgers blood group)  / reaction
 ENSG00000211896 IGHG1 / P01857 / immunoglobulin heavy constant gamma 1 (G1m marker)  / complex
 ENSG00000224389 C4B / P0C0L5 / complement C4B (Chido blood group)  / reaction
 ENSG00000159189 C1QC / P02747 / complement C1q C chain  / complex
 ENSG00000182326 C1S / P09871 / complement C1s  / complex






 

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